RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 USP9YO00507 2555 aaPredicted RBP14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 CENPVL3A0A0U1RRI6 287 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 NCR2O95944 276 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 IGKV1-17P01599 117 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 SMIM15Q7Z3B0 74 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 VPS25Q9BRG1 176 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 SRSF8Q9BRL6 282 aaKnown RBP14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 GAGE12BA1L429 117 aa14.28□□□□□ -0.12
PDLIM3-201ENST00000284767 PTPN13Q12923 2485 aa14.27□□□□□ -0.12
PDLIM3-201ENST00000284767 FGF6P10767 208 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 U3KQK5 164 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 ABCA12Q86UK0 2595 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 K7EIM0 57 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 CRIP1P50238 77 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 LGALS9BQ3B8N2 356 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 LGALS9CQ6DKI2 356 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
PDLIM3-201ENST00000284767 ANKRD17O75179 2603 aaKnown RBP14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 A0A096LNJ9 63 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 CLEC2AQ6UVW9 174 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 ARPC1AQ92747 370 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 SPOCK3Q9BQ16 436 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 K7ERU9 68 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 NPFFO15130 113 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 EBI3Q14213 229 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 C17orf77Q96MU5 243 aa14.26□□□□□ -0.13
PDLIM3-201ENST00000284767 ZANQ9Y493 2812 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 OOSP1A8MZH6 123 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 ZNF562Q6V9R5 426 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 Q8N9W7 124 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 TPPP3Q9BW30 176 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 SIGLEC8Q9NYZ4 499 aa14.25□□□□□ -0.13
PDLIM3-201ENST00000284767 A6NDN8 102 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 D6R8Y8 96 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 OR8A1Q8NGG7 326 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 ZNF414Q96IQ9 312 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 IGHV7-81A0A0B4J1V7 117 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 TRAV40A0A0B4J280 105 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 H3BRM9 83 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 MRPS12O15235 138 aaKnown RBP14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 PAX8Q06710 450 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 FOXE3Q13461 319 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 FAM104BQ5XKR9 115 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 BOD1L2Q8IYS8 172 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 PRELID3AQ96N28 172 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 FANCD2OSQ96PS1 177 aa14.24□□□□□ -0.13
PDLIM3-201ENST00000284767 SNAI2O43623 268 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 IGHV3-23P01764 117 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 FAM106CPP0CH98 169 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 EGR2P11161 476 aaPredicted RBP14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 PDE6HQ13956 83 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 FAM106AQ4KMX7 169 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 GTF2H5Q6ZYL4 71 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 ORMDL3Q8N138 153 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 ZNF491Q8N8L2 437 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 OR9G4Q8NGQ1 327 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 RNF125Q96EQ8 232 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 RABAC1Q9UI14 185 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 SERTM2A0A1B0GWG4 89 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 GAGE10A6NGK3 116 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 SIVA1O15304 175 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 S100A7AQ86SG5 101 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 TMEM219Q86XT9 240 aa14.23□□□□□ -0.13
PDLIM3-201ENST00000284767 C9orf118A6NHY6 69 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 LINC01548A6NM66 108 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 LOXL1Q08397 574 aaPredicted RBP14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 ASCL2Q99929 193 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 TMEM189A5PLL7 270 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 UFSP1Q6NVU6 142 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 C8orf49Q96NF6 230 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 AP1S3Q96PC3 154 aa14.22□□□□□ -0.13
PDLIM3-201ENST00000284767 SMAD7O15105 426 aaKnown RBP14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 HBDP02042 147 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 HSD52Q0P140 79 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 AAMDCQ9H7C9 122 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 NBPF19A0A087WUL8 3843 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 CHD6Q8TD26 2715 aa14.21□□□□□ -0.13
PDLIM3-201ENST00000284767 CSPG4Q6UVK1 2322 aa14.21□□□□□ -0.14
PDLIM3-201ENST00000284767 LOC389332A0A1B0GUA5 103 aa14.21□□□□□ -0.14
PDLIM3-201ENST00000284767 WI2-2373I1.2A0A1W2PRP0 233 aa14.21□□□□□ -0.14
PDLIM3-201ENST00000284767 GOSR1O95249 250 aa14.21□□□□□ -0.14
PDLIM3-201ENST00000284767 IL4P05112 153 aa14.21□□□□□ -0.14
PDLIM3-201ENST00000284767 IGLV11-55A0A075B6I3 123 aa14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 BCL6BQ8N143 479 aaPredicted RBP14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 M0R3E3 92 aa14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 COX8CQ7Z4L0 72 aa14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 AMN1Q8IY45 258 aa14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 OR4X2Q8NGF9 303 aa14.2□□□□□ -0.14
PDLIM3-201ENST00000284767 TMEM213A2RRL7 107 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 NDUFS8O00217 210 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 FCGR2BP31994 310 aaPredicted RBP14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 KRTAP10-9P60411 292 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 CACNG7P62955 275 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 ECSCRQ19T08 205 aa14.19□□□□□ -0.14
PDLIM3-201ENST00000284767 MAPK1IP1LQ8NDC0 245 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms