RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 MDS2Q8NDY4 140 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 TRAV26-2A0A0B4J265 109 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 ATP6V0E1O15342 81 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 SAA4P35542 130 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 ZNF134P52741 427 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 SPINK13Q1W4C9 94 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 BRD3OSQ6XYD6 125 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 C5orf24Q7Z6I8 188 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 C5orf47Q569G3 176 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 ZNF581Q9P0T4 197 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 DOCK5Q9H7D0 1870 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 CCL25O15444 150 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 CFHR4Q92496 578 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 KLK9Q9UKQ9 250 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 ZC2HC1AQ96GY0 325 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 DKK2Q9UBU2 259 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 PLXNB2O15031 1838 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 FUSP35637 526 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 MP68P56378 58 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 CRYGCP07315 174 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 XCL2Q9UBD3 114 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 F5H768 121 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 LINC00205P59089 165 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 LYPD2Q6UXB3 125 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 VOPP1Q96AW1 172 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 LENEPQ9Y5L5 61 aa6.95□□□□□ -1.3
SCUBE3-201ENST00000274938 ATAD5Q96QE3 1844 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 FXYD5Q96DB9 178 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 KLF2Q9Y5W3 355 aaPredicted RBP6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 RBAKDNA6NC62 111 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 ASXL3Q9C0F0 2248 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 ADAMTSL1Q8N6G6 1762 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 IGFBPL1Q8WX77 278 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 IGHV3-16A0A0C4DH30 117 aa6.94□□□□□ -1.3
SCUBE3-201ENST00000274938 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 TEN1Q86WV5 123 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 DOCK7Q96N67 2140 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 C3orf56Q8N813 242 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PTPRFP10586 1907 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 COL8A2P25067 703 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PRR20EP86478 221 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PRR20CP86479 221 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PRR20DP86480 221 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PRR20BP86481 221 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PRR20AP86496 221 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 ARFGEF1Q9Y6D6 1849 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 CHKB-CPT1BH3BT56 60 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 H3BUA1 57 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 PSMB8P28062 276 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 TDRD15B5MCY1 1934 aaKnown RBP6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 TP53BP1Q12888 1972 aaPredicted RBP6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 APOC4P55056 127 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 ETV2O00321 342 aaPredicted RBP6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 HIGD1BQ9P298 99 aa6.93□□□□□ -1.3
SCUBE3-201ENST00000274938 A0A0G2JNJ9 132 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 FHL1Q13642 323 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 SPATA25Q9BR10 227 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 Q9UFV3 132 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 RP1P56715 2156 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 WIPF3A6NGB9 483 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 C1orf147Q96MC9 270 aaPredicted RBP6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 XIRP1Q702N8 1843 aaKnown RBP6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 ABCA7Q8IZY2 2146 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 NDUFS5O43920 106 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 ATP5G1P05496 136 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 IGHV3-38A0A0C4DH36 116 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 A0A1B0GX51 115 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 E9PQ18 207 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 Q9H8V8 135 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 IGHV1-69P01742 117 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 Q0VFX4 171 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
SCUBE3-201ENST00000274938 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 Q71RC1 249 aaPredicted RBP6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 RGPD3A6NKT7 1758 aaPredicted RBP6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 MAP1BP46821 2468 aaKnown RBP6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 DYNAPQ8N1N2 210 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 ICOSQ9Y6W8 199 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 TUBGCP6Q96RT7 1819 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 K7EN84 100 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 C17orf58Q2M2W7 97 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
SCUBE3-201ENST00000274938 CD59P13987 128 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 TEX36Q5VZQ5 186 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 ANKRD36A6QL64 1941 aa6.9□□□□□ -1.3
SCUBE3-201ENST00000274938 JMJD7-PLA2G4BH0Y9G9 81 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms