RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FAM104BQ5XKR9 115 aa9.87□□□□□ -0.83
SRRM4-201ENST00000267260 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
SRRM4-201ENST00000267260 FUSP35637 526 aaKnown RBP eCLIP9.86□□□□□ -0.83
SRRM4-201ENST00000267260 TMEM14EPQ6UXP3 125 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 A0A087WWL8 130 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 IGKV1D-43A0A0B4J1Z2 117 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 IGHV2-70P01814 119 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 E9PLN8 166 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 PFN2P35080 140 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 LAIR2Q6ISS4 152 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 Q8N8P6 123 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 A0A0A6YYD4 124 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 LYL1P12980 280 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 CD24P25063 80 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 KLF5Q13887 457 aaPredicted RBP9.86□□□□□ -0.83
SRRM4-201ENST00000267260 KLHL30-AS1Q8NEE0 82 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 DEFB104AQ8WTQ1 72 aa9.86□□□□□ -0.83
SRRM4-201ENST00000267260 SRRM5B3KS81 715 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 BUB1B-PAK6H3BSN5 160 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 CSRP2Q16527 193 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 LYZL4Q96KX0 146 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 IGHV1-18A0A0C4DH31 117 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 CFPP27918 469 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 ATP1A1-AS1Q5TC04 95 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 H0YJW9 148 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 CELA3AP09093 270 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 RPP25LQ8N5L8 163 aaKnown RBP9.85□□□□□ -0.83
SRRM4-201ENST00000267260 PRSS57Q6UWY2 283 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 TRBV6-6A0A0A6YYG2 114 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 LGALS9CQ6DKI2 356 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
SRRM4-201ENST00000267260 NMSQ5H8A3 153 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 K7EMI3 77 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 LHFPL1Q86WI0 220 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 MCRIP2Q9BUT9 160 aaKnown RBP9.84□□□□□ -0.83
SRRM4-201ENST00000267260 Q86TA4 180 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 Q8TAT8 98 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 APOC4P55056 127 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 HERVK_113P63121 156 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 C18orf32Q8TCD1 76 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 EXPH5Q8NEV8 1989 aa9.84□□□□□ -0.83
SRRM4-201ENST00000267260 HLA-DRB4P13762 266 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 HLA-DRB4X5D2U9 266 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 SIGLEC9Q9Y336 463 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 IGHV1-46P01743 117 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 ZNF492Q9P255 531 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 A0A1B0GX51 115 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 B4DSR2 109 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 GATA3P23771 443 aa9.83□□□□□ -0.84
SRRM4-201ENST00000267260 IGKV1-9A0A0C4DH69 117 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 IGLV3-12A0A075B6K2 115 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.82□□□□□ -0.84
SRRM4-201ENST00000267260 RSPO4Q2I0M5 234 aaPredicted RBP9.82□□□□□ -0.84
SRRM4-201ENST00000267260 NPYP01303 97 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 EFNA4P52798 201 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 TMEM219Q86XT9 240 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 NDPQ00604 133 aa9.82□□□□□ -0.84
SRRM4-201ENST00000267260 K7ERJ3 54 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 PSMB8P28062 276 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 Q6ZS49 121 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 C14orf132Q9NPU4 83 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 C22orf46C9J442 243 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 RNASE2P10153 161 aaKnown RBP9.81□□□□□ -0.84
SRRM4-201ENST00000267260 DEFB121Q5J5C9 76 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 MUSTN1Q8IVN3 82 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 F8VRH5 84 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 HGFACQ04756 655 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 CFHR4Q92496 578 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 DAD1P61803 113 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 PFN1P07737 140 aaKnown RBP9.81□□□□□ -0.84
SRRM4-201ENST00000267260 CFHR2P36980 270 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 PAQR4Q8N4S7 273 aaPredicted RBP9.81□□□□□ -0.84
SRRM4-201ENST00000267260 PTPRBP23467 1997 aa9.81□□□□□ -0.84
SRRM4-201ENST00000267260 ZNF837Q96EG3 531 aaPredicted RBP9.81□□□□□ -0.84
SRRM4-201ENST00000267260 A0A0B4J2C4 111 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 LHBP01229 141 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 IGLV3-19P01714 112 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 ZNF672Q499Z4 452 aaPredicted RBP9.8□□□□□ -0.84
SRRM4-201ENST00000267260 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 SPRR3Q9UBC9 169 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 NTF4P34130 210 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
SRRM4-201ENST00000267260 LINC01356Q8N9X3 169 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms