RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 C5orf64Q2M2E5 130 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 ANKRD39Q53RE8 183 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 ZNF833PQ6ZTB9 187 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 SHANK2-AS3Q9BTD1 123 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 TNFRSF18Q9Y5U5 241 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 TRAV21A0A0B4J279 112 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 PLNP26678 52 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 OR13C6PQ8NH95 151 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 Q8TCH9 128 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 TEX48A0A1B0GUV7 120 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 A0A1W2PNU3 283 aaPredicted RBP9.23□□□□□ -0.93
VPS33A-201ENST00000267199 PIMREGQ9BSJ6 248 aa9.23□□□□□ -0.93
VPS33A-201ENST00000267199 TRAV8-4A0A0B4J246 113 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 LOXP28300 417 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-201ENST00000267199 FAM120AOSQ5T036 256 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 TMEM75Q8N9X5 138 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 MRPL35Q9NZE8 188 aaKnown RBP9.22□□□□□ -0.93
VPS33A-201ENST00000267199 KMT2EQ8IZD2 1858 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 HAX1O00165 279 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 TAX1BP3O14907 124 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 PRR30Q53SZ7 412 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-201ENST00000267199 LGALS9CQ6DKI2 356 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 ZNF295-AS1Q8N0V1 137 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 RNF5Q99942 180 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 TRBV19A0A075B6N1 114 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 LINC01549A6NIU2 74 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 C9JAW5 83 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 TTTY13Q9BZ97 58 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 CSTL1Q9H114 145 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 ZNF562Q6V9R5 426 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 VMO1Q7Z5L0 202 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 RNF182Q8N6D2 247 aa9.22□□□□□ -0.93
VPS33A-201ENST00000267199 PTPRSQ13332 1948 aa9.21□□□□□ -0.93
VPS33A-201ENST00000267199 EML5Q05BV3 1969 aa9.21□□□□□ -0.93
VPS33A-201ENST00000267199 WISP2O76076 250 aa9.21□□□□□ -0.93
VPS33A-201ENST00000267199 SNRPD3P62318 126 aaKnown RBP9.21□□□□□ -0.93
VPS33A-201ENST00000267199 SH2D6Q7Z4S9 175 aa9.21□□□□□ -0.93
VPS33A-201ENST00000267199 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.93
VPS33A-201ENST00000267199 EFNA4P52798 201 aa9.21□□□□□ -0.94
VPS33A-201ENST00000267199 LYPD1Q8N2G4 141 aa9.21□□□□□ -0.94
VPS33A-201ENST00000267199 SPRY4Q9C004 299 aa9.21□□□□□ -0.94
VPS33A-201ENST00000267199 KLF5Q13887 457 aaPredicted RBP9.21□□□□□ -0.94
VPS33A-201ENST00000267199 NPFFO15130 113 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 TEX36Q5VZQ5 186 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 NUP210LQ5VU65 1888 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 WIPF2Q8TF74 440 aaPredicted RBP9.2□□□□□ -0.94
VPS33A-201ENST00000267199 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 NDUFS7O75251 213 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 SLC25A16P16260 332 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 VGLL1Q99990 258 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 DKK4Q9UBT3 224 aa9.2□□□□□ -0.94
VPS33A-201ENST00000267199 IGF2RP11717 2491 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 PTPN13Q12923 2485 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 UBE2L6O14933 153 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 SRSF8Q9BRL6 282 aaKnown RBP9.19□□□□□ -0.94
VPS33A-201ENST00000267199 C7orf69Q9H7B7 122 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 IGKV1OR2-108A0A075B7D4 117 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 PRSS46E5RG02 174 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 C3orf36Q3SXR2 165 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 TMEM219Q86XT9 240 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 NACAE9PAV3 2078 aa9.19□□□□□ -0.94
VPS33A-201ENST00000267199 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 CD28P10747 220 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 A0A087WWL8 130 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 PRR25Q96S07 402 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
VPS33A-201ENST00000267199 PRRC2CQ9Y520 2896 aaKnown RBP9.18□□□□□ -0.94
VPS33A-201ENST00000267199 IGHV3-73A0A0B4J1V6 119 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 F8W1H4 67 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 PAX8Q06710 450 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 LINC00311Q8N616 119 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 CCL19Q99731 98 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 LY6DQ14210 128 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 C2orf82Q6UX34 121 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 IL17RELQ6ZVW7 336 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 TP53TG3Q9ULZ0 132 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 LTAP01374 205 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 PAX1P15863 534 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
VPS33A-201ENST00000267199 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 NEGR1Q7Z3B1 354 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 NDUFB8O95169 186 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 GTSF1Q8WW33 167 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 IGF2BP2-AS1Q96M15 143 aa9.17□□□□□ -0.94
VPS33A-201ENST00000267199 K7EM74 188 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 LHBP01229 141 aa9.16□□□□□ -0.94
VPS33A-201ENST00000267199 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms