RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CLEC19AQ6UXS0 136 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 TCAPO15273 167 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 LINC00614P0C842 121 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 Q6AWC8 147 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 LYZL1Q6UWQ5 148 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
CPSF6-201ENST00000266679 CCDC140Q96MF4 163 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 PRR25Q96S07 402 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 UQCR10Q9UDW1 63 aa9.99□□□□□ -0.81
CPSF6-201ENST00000266679 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 MUC21A0A0G2JKD1 596 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 MUC21A0A140T8X8 626 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 M0QZK8 103 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 IGHG4P01861 327 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 MUC21Q5SSG8 566 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 C5orf56Q8N8D9 126 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 TMEM70Q9BUB7 260 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV3OR16-13A0A075B7E8 117 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV3-74A0A0B4J1X5 117 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 A0A1B0GW15 77 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 TMEM213A2RRL7 107 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 LEPROTL1O95214 131 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 GOSR1O95249 250 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 S100A7P31151 101 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 SAPCD1Q5SSQ6 148 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 Q6ZN92 141 aa9.98□□□□□ -0.81
CPSF6-201ENST00000266679 TIMM8BQ9Y5J9 83 aaPredicted RBP9.98□□□□□ -0.81
CPSF6-201ENST00000266679 SVEP1Q4LDE5 3571 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 IGHV3-49A0A0A0MS15 119 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 ZNF207O43670 478 aaKnown RBP9.97□□□□□ -0.81
CPSF6-201ENST00000266679 RPLP1P05386 114 aaKnown RBP9.97□□□□□ -0.81
CPSF6-201ENST00000266679 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
CPSF6-201ENST00000266679 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
CPSF6-201ENST00000266679 ERCC8Q13216 396 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 TRAV9-2A0A087WT02 112 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 PRAC2D3DTV9 90 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 BRD3OSQ6XYD6 125 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 KLHDC1Q8N7A1 406 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 LINC00527Q9UJ94 153 aa9.97□□□□□ -0.81
CPSF6-201ENST00000266679 ZANQ9Y493 2812 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 G0S2P27469 103 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 KLK9Q2XQG4 91 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 MOB4Q9Y3A3 225 aa9.96□□□□□ -0.82
CPSF6-201ENST00000266679 A0A087X0K7 114 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 IGHV4-61A0A0C4DH41 118 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 CLPSL1A2RUU4 121 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 BUB3O43684 328 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 PIMREGQ9BSJ6 248 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 IGHV1-69DA0A0B4J2H0 117 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 OR4C46A6NHA9 309 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 FBLL1A6NHQ2 334 aaKnown RBP9.95□□□□□ -0.82
CPSF6-201ENST00000266679 H0Y8G0 127 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 IGHV1-69P01742 117 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 PAX8Q06710 450 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 CCL19Q99731 98 aa9.95□□□□□ -0.82
CPSF6-201ENST00000266679 D6R8Y8 96 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 IGLL1P15814 213 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 ATP5G2Q06055 141 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 TRAV41A0A0B4J266 112 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 BMI1P35226 326 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 FER1L6-AS1Q8NA97 138 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
CPSF6-201ENST00000266679 MCRIP2Q9BUT9 160 aaKnown RBP9.94□□□□□ -0.82
CPSF6-201ENST00000266679 LOC389332A0A1B0GUA5 103 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 C20orf202A1L168 122 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 ORM1P02763 201 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 OR5AL1P0C617 328 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 RAB9AP51151 201 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
CPSF6-201ENST00000266679 METTL26Q96S19 204 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 MAP1LC3CQ9BXW4 147 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
CPSF6-201ENST00000266679 FAM104BQ5XKR9 115 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 SLC50A1Q9BRV3 221 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 HSPB8Q9UJY1 196 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 hDV102S1A0JD36 115 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 CRXO43186 299 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-201ENST00000266679 TRGV3P03979 118 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 IGHV4-38-2P0DP08 117 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-201ENST00000266679 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-201ENST00000266679 TFPI2P48307 235 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 TWIST1Q15672 202 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 LY6EQ16553 131 aa9.92□□□□□ -0.82
CPSF6-201ENST00000266679 MRPL51Q4U2R6 128 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms