RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 RIPPLY3P57055 190 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 C5orf64Q2M2E5 130 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 ARPC1AQ92747 370 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 JMJD8Q96S16 334 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 JKAMPQ9P055 326 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 SMAD5-AS1Q9Y6J3 95 aa13.09□□□□□ -0.31
SQLE-201ENST00000265896 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.31
SQLE-201ENST00000265896 LY6LH3BQJ8 138 aa13.08□□□□□ -0.31
SQLE-201ENST00000265896 HOXB4P17483 251 aaPredicted RBP13.08□□□□□ -0.31
SQLE-201ENST00000265896 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.31
SQLE-201ENST00000265896 PRR25Q96S07 402 aa13.08□□□□□ -0.31
SQLE-201ENST00000265896 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 MFAP4P55083 255 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 TCF15Q12870 199 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 G3V318 75 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 CFHR4Q92496 578 aa13.08□□□□□ -0.32
SQLE-201ENST00000265896 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
SQLE-201ENST00000265896 POLQO75417 2590 aa13.07□□□□□ -0.32
SQLE-201ENST00000265896 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
SQLE-201ENST00000265896 IGKV2D-26A0A0A0MRZ7 120 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 K7ERJ3 54 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 OCIAD2Q56VL3 154 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 CLEC3BP05452 202 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 PRSS1P07477 247 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 CTSGP08311 255 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 IFI27L1Q96BM0 104 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 KLK15Q9H2R5 256 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 UFC1Q9Y3C8 167 aa13.06□□□□□ -0.32
SQLE-201ENST00000265896 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
SQLE-201ENST00000265896 GAGE10A6NGK3 116 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 IGHG4P01861 327 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 LEPP41159 167 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 TNFRSF14Q92956 283 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 TRGV3P03979 118 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 FGF6P10767 208 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 ZFP36P26651 326 aaKnown RBP13.05□□□□□ -0.32
SQLE-201ENST00000265896 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 ZANQ9Y493 2812 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 IGLV11-55A0A075B6I3 123 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 C15orf32Q32M92 178 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 GTSCR1Q86UQ5 136 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 AP1S3Q96PC3 154 aa13.05□□□□□ -0.32
SQLE-201ENST00000265896 GCSHP23434 173 aa13.04□□□□□ -0.32
SQLE-201ENST00000265896 HBDP02042 147 aa13.04□□□□□ -0.32
SQLE-201ENST00000265896 KIR3DS1Q14943 382 aa13.04□□□□□ -0.32
SQLE-201ENST00000265896 CLEC19AQ6UXS0 136 aa13.04□□□□□ -0.32
SQLE-201ENST00000265896 ZNF575Q86XF7 245 aa13.04□□□□□ -0.32
SQLE-201ENST00000265896 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
SQLE-201ENST00000265896 FLNCQ14315 2725 aa13.03□□□□□ -0.32
SQLE-201ENST00000265896 CD5LO43866 347 aa13.03□□□□□ -0.32
SQLE-201ENST00000265896 ITPR1Q14643 2758 aa13.03□□□□□ -0.32
SQLE-201ENST00000265896 LCNL1Q6ZST4 164 aa13.02□□□□□ -0.32
SQLE-201ENST00000265896 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.32
SQLE-201ENST00000265896 IGF1P05019 195 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 MTURNQ8N3F0 131 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 C11orf21Q9P2W6 132 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 A1L4Q6 167 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 MEGF9Q9H1U4 602 aa13.02□□□□□ -0.33
SQLE-201ENST00000265896 TMEM160Q9NX00 188 aa13.01□□□□□ -0.33
SQLE-201ENST00000265896 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
SQLE-201ENST00000265896 CDKN1BP46527 198 aa13.01□□□□□ -0.33
SQLE-201ENST00000265896 FOXC2Q99958 501 aa13.01□□□□□ -0.33
SQLE-201ENST00000265896 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
SQLE-201ENST00000265896 IGHV7-81A0A0B4J1V7 117 aa13□□□□□ -0.33
SQLE-201ENST00000265896 ZNF562Q6V9R5 426 aa13□□□□□ -0.33
SQLE-201ENST00000265896 WFDC12Q8WWY7 111 aa13□□□□□ -0.33
SQLE-201ENST00000265896 AGRNO00468 2067 aa13□□□□□ -0.33
SQLE-201ENST00000265896 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 SMAD7O15105 426 aaKnown RBP12.99□□□□□ -0.33
SQLE-201ENST00000265896 EFNA4P52798 201 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 IGF2-ASQ6U949 168 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 ATP6V0E1O15342 81 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 CEACAM3P40198 252 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 A0A0G2JLM5 398 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 TNFRSF6BO95407 300 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 TIMD4Q96H15 378 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 RAB1BQ9H0U4 201 aa12.99□□□□□ -0.33
SQLE-201ENST00000265896 FCER1GP30273 86 aa12.98□□□□□ -0.33
SQLE-201ENST00000265896 FXYD2P54710 66 aa12.98□□□□□ -0.33
SQLE-201ENST00000265896 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
SQLE-201ENST00000265896 GLMPQ8WWB7 406 aa12.98□□□□□ -0.33
SQLE-201ENST00000265896 DTX2Q86UW9 622 aa12.98□□□□□ -0.33
SQLE-201ENST00000265896 NDUFA3O95167 84 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 VKORC1Q9BQB6 163 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 TRAV40A0A0B4J280 105 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 IGKV3D-20A0A0C4DH25 116 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 SAPCD1Q5SSQ6 148 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 OR11H6Q8NGC7 330 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 CACNA1AO00555 2505 aa12.97□□□□□ -0.33
SQLE-201ENST00000265896 BOD1L2Q8IYS8 172 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SQLE-201ENST00000265896 MAP1LC3AQ9H492 121 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms