RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 NHP2Q9NX24 153 aaKnown RBP12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 HIST1H1AQ02539 215 aaPredicted RBP12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 BRD3OSQ6XYD6 125 aa12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
PDZRN3-201ENST00000263666 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 SMIM17P0DL12 118 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 MTURNQ8N3F0 131 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 MBD6Q96DN6 1003 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 NCOR1P1Q9H4R4 102 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 H3BVH4 76 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 PAX1P15863 534 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 FAM74A4Q5TZK3 123 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 LRRK2Q5S007 2527 aa12.77□□□□□ -0.36
PDZRN3-201ENST00000263666 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 FABP5P3A8MUU1 101 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 PRB1P04280 392 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 PLP1P60201 277 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 ORAOV1Q8WV07 137 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 SIGLEC8Q9NYZ4 499 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 NPYP01303 97 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 ESDP10768 282 aa12.77□□□□□ -0.37
PDZRN3-201ENST00000263666 DMXL1Q9Y485 3027 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 TGFAP01135 160 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 HIST1H4GQ99525 98 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 MEGF9Q9H1U4 602 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 TRGV3P03979 118 aa12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDZRN3-201ENST00000263666 LAMA5O15230 3695 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 K7EIM0 57 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 MRPL51Q4U2R6 128 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 PHLDA3Q9Y5J5 127 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 FABP2P12104 132 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 DKK2Q9UBU2 259 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
PDZRN3-201ENST00000263666 ZNF492Q9P255 531 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 H7C2G1 150 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 BVES-AS1Q5T3Y7 98 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 JKAMPQ9P055 326 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 FAM231BA6NCW3 169 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 TEX22C9J3V5 150 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 EMP1P54849 157 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 TNFRSF14Q92956 283 aa12.74□□□□□ -0.37
PDZRN3-201ENST00000263666 GAGE12BA1L429 117 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 EGR2P11161 476 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 Q8N976 141 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 PTPRBP23467 1997 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 I3L2K1 104 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 DEFB1P60022 68 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 SIGLEC15Q6ZMC9 328 aa12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 WIPF2Q8TF74 440 aaPredicted RBP12.73□□□□□ -0.37
PDZRN3-201ENST00000263666 CTRLP40313 264 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 C7orf69Q9H7B7 122 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 H3BRN7 92 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 EFNA4P52798 201 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 Q6AWC8 147 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
PDZRN3-201ENST00000263666 FCN3O75636 299 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 KLF5Q13887 457 aaPredicted RBP12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 PRR25Q96S07 402 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 ZNF292O60281 2723 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 HAX1O00165 279 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 ATP5G2Q06055 141 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 OR2K2Q8NGT1 345 aa12.71□□□□□ -0.37
PDZRN3-201ENST00000263666 RNASE4P34096 147 aaKnown RBP12.71□□□□□ -0.38
PDZRN3-201ENST00000263666 GAGE1Q13065 139 aa12.71□□□□□ -0.38
PDZRN3-201ENST00000263666 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 JMJD8Q96S16 334 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 PKD1L2Q7Z442 2459 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 ATP6V0E1O15342 81 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 ZZEF1O43149 2961 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 SCGB1C2P0DMR2 95 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 A0A0G2JLM5 398 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 K7ERJ3 54 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 CT83Q5H943 113 aa12.7□□□□□ -0.38
PDZRN3-201ENST00000263666 GFRA4Q9GZZ7 299 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 A0A1B0GXF2 115 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 SAA4P35542 130 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 BPESC1Q9GZL8 116 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 RAI1Q7Z5J4 1906 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 EEF1AKMT3Q96AZ1 226 aa12.69□□□□□ -0.38
PDZRN3-201ENST00000263666 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms