RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 IGKV1-39P01597 117 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 IGKV1D-39P04432 117 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 C14orf144Q96I85 54 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 U3KQE9 123 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 TRAV1-1A0A0B4J248 108 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 MMP23AO75900 390 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 Q8NA96 180 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 HEATR5BQ9P2D3 2071 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 NUP35Q8NFH5 326 aa10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 ZNF48Q96MX3 618 aaPredicted RBP10.72□□□□□ -0.69
PDGFRB-201ENST00000261799 PLXNA2O75051 1894 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 IGHV4OR15-8A0A075B7B6 117 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 A0A087WW49 117 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 IGKV1-6A0A0C4DH72 117 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 RNF183Q96D59 192 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 PRSS46E5RG02 174 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 ZNF114Q8NC26 417 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
PDGFRB-201ENST00000261799 A0A1B0GW64 132 aa10.71□□□□□ -0.7
PDGFRB-201ENST00000261799 FHL1Q13642 323 aa10.71□□□□□ -0.7
PDGFRB-201ENST00000261799 A0A1W2PNU3 283 aaPredicted RBP10.71□□□□□ -0.7
PDGFRB-201ENST00000261799 CRLF1O75462 422 aa10.71□□□□□ -0.7
PDGFRB-201ENST00000261799 TP53TG1Q9Y2A0 90 aa10.71□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV4-31P0DP07 118 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 Q6ZQT7 251 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 C5orf56Q8N8D9 126 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 CEP290O15078 2479 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 AHCTF1Q8WYP5 2266 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 CLPSL2Q6UWE3 100 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 Q6ZWC4 215 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 VWC2LB2RUY7 222 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 A0A0G2JRQ6 117 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 HLA-DRB4P13762 266 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 NHP2Q9NX24 153 aaKnown RBP10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 HLA-DRB4X5D2U9 266 aa10.7□□□□□ -0.7
PDGFRB-201ENST00000261799 TIRAPP58753 221 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 IGLL5B9A064 214 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 BLCAPP62952 87 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 ZNF493Q6ZR52 646 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 SMKR1H3BMG3 65 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 SPRY4Q9C004 299 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 FANCMQ8IYD8 2048 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 H3BMM0 161 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 GSN-AS1Q9NRJ2 163 aa10.69□□□□□ -0.7
PDGFRB-201ENST00000261799 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 C5orf30Q96GV9 206 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 A8MXK9 166 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 PFN2P35080 140 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 WT1-ASQ06250 92 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 C19orf84I3L1E1 186 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 SPRY2O43597 315 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 LY6G6DO95868 133 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 GYPEP15421 78 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 ZNF503Q96F45 646 aa10.68□□□□□ -0.7
PDGFRB-201ENST00000261799 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 TAL2Q16559 108 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 WFDC11Q8NEX6 87 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 SPCS1Q9Y6A9 102 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 A0A1B0GV72 72 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 CACNA1BQ00975 2339 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 HILS1P60008 231 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 IGHV7-81A0A0B4J1V7 117 aa10.67□□□□□ -0.7
PDGFRB-201ENST00000261799 CTAG1AP78358 180 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 SPRNQ5BIV9 151 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 SEC16AO15027 2179 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 SPTBP11277 2137 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 UBE2CO00762 179 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 HERVK_113P63121 156 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 Q6ZRM9 215 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 PRR25Q96S07 402 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 K7EQD1 137 aa10.66□□□□□ -0.7
PDGFRB-201ENST00000261799 DEFB135Q30KP9 77 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 SPATA25Q9BR10 227 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 COL4A4P53420 1690 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 TRAV8-2A0A0B4J237 113 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 BCL6BQ8N143 479 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 RBAKDNA6NC62 111 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 Q8N8P6 123 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 C2orf70A6NJV1 201 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 SEM1Q6ZVN7 128 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 C11orf45Q8TAV5 145 aa10.65□□□□□ -0.7
PDGFRB-201ENST00000261799 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.71
PDGFRB-201ENST00000261799 C11orf53Q8IXP5 236 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms