RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 FER1L6-AS1Q8NA97 138 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 U3KQK5 164 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 CBY3A6NI87 242 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 G3V318 75 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 TAX1BP3O14907 124 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 CKS2P33552 79 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 RHOGP84095 191 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 VAMP3Q15836 100 aa12.68□□□□□ -0.38
TM9SF1-201ENST00000261789 ATP6V0E1O15342 81 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 UCNP55089 124 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 EBI3Q14213 229 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 SPTAN1Q13813 2472 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 ZNF207O43670 478 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 SIRPDQ9H106 197 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
TM9SF1-201ENST00000261789 PCP4P48539 62 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 CACNG7P62955 275 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 KLRB1Q12918 225 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 PRSS57Q6UWY2 283 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 AJUBAQ96IF1 538 aa12.66□□□□□ -0.38
TM9SF1-201ENST00000261789 COX8AP10176 69 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 MINOS1Q5TGZ0 78 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 C1orf122Q6ZSJ8 110 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 MINOS1-NBL1R4GNA1 71 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 IL17RELQ6ZVW7 336 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 COX8CQ7Z4L0 72 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 ZNF502Q8TBZ5 544 aa12.65□□□□□ -0.38
TM9SF1-201ENST00000261789 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 BUB3O43684 328 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 BMI1P35226 326 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 SAA4P35542 130 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 PAX8Q06710 450 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 EVI2AP22794 236 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 C12orf54Q6X4T0 127 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 Q6ZQT7 251 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 UBTD1Q9HAC8 227 aa12.64□□□□□ -0.39
TM9SF1-201ENST00000261789 OOSP1A8MZH6 123 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 HIST1H1AQ02539 215 aaPredicted RBP12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 OR4C5Q8NGB2 326 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 CCDC140Q96MF4 163 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 HBDP02042 147 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 PSMG3-AS1Q96PY0 264 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 LINC00527Q9UJ94 153 aa12.63□□□□□ -0.39
TM9SF1-201ENST00000261789 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 PIEZO1Q92508 2521 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 CELSR2Q9HCU4 2923 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 FGF6P10767 208 aa12.62□□□□□ -0.39
TM9SF1-201ENST00000261789 IGHV3OR16-10A0A075B7F0 116 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 SCGB2A1O75556 95 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 UQCRFS1P47985 274 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 AMMECR1LQ6DCA0 310 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 TMEM219Q86XT9 240 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 IFI27L1Q96BM0 104 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 BPESC1Q9GZL8 116 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 DKK2Q9UBU2 259 aa12.61□□□□□ -0.39
TM9SF1-201ENST00000261789 UBE2E1P51965 193 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 RPS20P60866 119 aaKnown RBP12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 CRYBG3Q68DQ2 2970 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 IGKV3D-20A0A0C4DH25 116 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 LGALS9BQ3B8N2 356 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 AGPAT4-IT1Q9H0P7 198 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 SELENOKQ9Y6D0 94 aa12.6□□□□□ -0.39
TM9SF1-201ENST00000261789 GOSR1O95249 250 aa12.59□□□□□ -0.39
TM9SF1-201ENST00000261789 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
TM9SF1-201ENST00000261789 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
TM9SF1-201ENST00000261789 TRAV8-2A0A0B4J237 113 aa12.58□□□□□ -0.4
TM9SF1-201ENST00000261789 TRGV3P03979 118 aa12.58□□□□□ -0.4
TM9SF1-201ENST00000261789 LY6DQ14210 128 aa12.58□□□□□ -0.4
TM9SF1-201ENST00000261789 PCP2Q8IVA1 136 aa12.58□□□□□ -0.4
TM9SF1-201ENST00000261789 TNFRSF6BO95407 300 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 NMUP48645 174 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 TMEM97Q5BJF2 176 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 CSMD2Q7Z408 3487 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 CENPVL3A0A0U1RRI6 287 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 CD5LO43866 347 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 LEPP41159 167 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 LMO4P61968 165 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
TM9SF1-201ENST00000261789 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 TRAV26-2A0A0B4J265 109 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms