RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 EFNA2O43921 213 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 TEN1Q86WV5 123 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 NDUFS5O43920 106 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 NBL1P41271 181 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 BRWD1Q9NSI6 2320 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 DOCK4Q8N1I0 1966 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 C11orf52Q96A22 123 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 FLVCR1-AS1Q8TAF5 88 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 SPRR3Q9UBC9 169 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 PDCD11Q14690 1871 aaKnown RBP8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 TRBV19A0A075B6N1 114 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 ZC2HC1AQ96GY0 325 aa8.63□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1-6A0A0C4DH72 117 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 M0R1W7 72 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 RUSC1-AS1Q66K80 236 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 DKK1O94907 266 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 PLA2G5P39877 138 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 RNF183Q96D59 192 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
SLC6A4-201ENST00000261707 NYNRINQ9P2P1 1898 aaKnown RBP8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 RBBP6Q7Z6E9 1792 aaKnown RBP8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 ZNF493Q6ZR52 646 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 MDS2Q8NDY4 140 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 TMEM14BQ9NUH8 114 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 C9orf66Q5T8R8 295 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 MYO7AQ13402 2215 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1-16P04430 117 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 Q9HAA7 133 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV2D-24A0A075B6R9 120 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 F6UB75 175 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 MINOS1Q5TGZ0 78 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 DUX4L9Q6RFH8 374 aaPredicted RBP8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
SLC6A4-201ENST00000261707 CCL18P55774 89 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 ORMDL1Q9P0S3 153 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1OR2-108A0A075B7D4 117 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 K7EMI3 77 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 GAFA1Q96PS6 74 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 C5orf64Q2M2E5 130 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 VOPP1Q96AW1 172 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 J3QLI3 93 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 MPDZO75970 2070 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 BUB1B-PAK6H3BSN5 160 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 ATP6V0E2Q8NHE4 81 aa8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 TP53BP1Q12888 1972 aaPredicted RBP8.6□□□□□ -1.03
SLC6A4-201ENST00000261707 IGLV3-12A0A075B6K2 115 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 PSMB8P28062 276 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 PRR25Q96S07 402 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 KNTC1P50748 2209 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 LTAP01374 205 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 EGR2P11161 476 aaPredicted RBP8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 GGNQ86UU5 652 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 ARID2Q68CP9 1835 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 PINLYPA6NC86 204 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 FXYD2P54710 66 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 PRR30Q53SZ7 412 aaPredicted RBP8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 LINC00173Q6ZV60 143 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 NHSL1Q5SYE7 1610 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 USMG5Q96IX5 58 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 C20orf78Q9BR46 151 aa8.59□□□□□ -1.03
SLC6A4-201ENST00000261707 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.04
SLC6A4-201ENST00000261707 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.04
SLC6A4-201ENST00000261707 TMEM14CQ9P0S9 112 aa8.59□□□□□ -1.04
SLC6A4-201ENST00000261707 ICOSQ9Y6W8 199 aa8.59□□□□□ -1.04
SLC6A4-201ENST00000261707 FAM223BA6NKX1 122 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 NXPH4O95158 308 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 FAM223AQ8IWN6 122 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 A0A0G2JMZ2 1700 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 LRRC37A2A6NM11 1700 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 LRRC37AA6NMS7 1700 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 FHL1Q13642 323 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 NDUFA4L2Q9NRX3 87 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 COL18A1P39060 1754 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 DEFB131AP59861 70 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 FXYD5Q96DB9 178 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 RHPN1-AS1Q9BWJ2 59 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 RHODO00212 210 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 FAM120AOSQ5T036 256 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 XCL2Q9UBD3 114 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 ASXL3Q9C0F0 2248 aa8.58□□□□□ -1.04
SLC6A4-201ENST00000261707 PRB2P02812 416 aaPredicted RBP8.57□□□□□ -1.04
SLC6A4-201ENST00000261707 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
SLC6A4-201ENST00000261707 HERVK_113P63121 156 aa8.57□□□□□ -1.04
SLC6A4-201ENST00000261707 MDC1Q14676 2089 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms