RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DEFB125Q8N687 156 aa11.81□□□□□ -0.52
DDX56-201ENST00000258772 ZNF502Q8TBZ5 544 aa11.81□□□□□ -0.52
DDX56-201ENST00000258772 NDUFS7O75251 213 aa11.81□□□□□ -0.52
DDX56-201ENST00000258772 FXYD7P58549 80 aa11.81□□□□□ -0.52
DDX56-201ENST00000258772 SRSF2Q01130 221 aaKnown RBP11.81□□□□□ -0.52
DDX56-201ENST00000258772 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
DDX56-201ENST00000258772 ATRXP46100 2492 aa11.81□□□□□ -0.52
DDX56-201ENST00000258772 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 SMKR1H3BMG3 65 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 NPYP01303 97 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 ORM1P02763 201 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 CLEC3BP05452 202 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 RHOGP84095 191 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 A0A1W2PPR1 153 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 FABP5P3A8MUU1 101 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 BUB3O43684 328 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 HBDP02042 147 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 ECSCRQ19T08 205 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 LGALS9CQ6DKI2 356 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 C2orf91Q6ZV80 131 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 DPF1Q92782 380 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 AJUBAQ96IF1 538 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
DDX56-201ENST00000258772 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 RAB9AP51151 201 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 ERCC8Q13216 396 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 FOXE3Q13461 319 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 VAMP3Q15836 100 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 KLK9Q2XQG4 91 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 MSRB1Q9NZV6 116 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 KLK9Q9UKQ9 250 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 RAXQ9Y2V3 346 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 IGF2RP11717 2491 aa11.79□□□□□ -0.52
DDX56-201ENST00000258772 SNAI2O43623 268 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 UBE2E1P51965 193 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 UCNP55089 124 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 SVEP1Q4LDE5 3571 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 ATP6V0E1O15342 81 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 ERASQ7Z444 233 aa11.78□□□□□ -0.52
DDX56-201ENST00000258772 CD5LO43866 347 aa11.77□□□□□ -0.52
DDX56-201ENST00000258772 NHLH1Q02575 133 aa11.77□□□□□ -0.52
DDX56-201ENST00000258772 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.52
DDX56-201ENST00000258772 RNF185Q96GF1 192 aa11.77□□□□□ -0.52
DDX56-201ENST00000258772 FGF6P10767 208 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 CACNG7P62955 275 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 RNF182Q8N6D2 247 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 OR4C5Q8NGB2 326 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 IFI27L1Q96BM0 104 aa11.77□□□□□ -0.53
DDX56-201ENST00000258772 CLPSL1A2RUU4 121 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 LINC01559Q495D7 138 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 PRSS57Q6UWY2 283 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 LINC01548A6NM66 108 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 SAA4P35542 130 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 RNASE8Q8TDE3 154 aaKnown RBP11.76□□□□□ -0.53
DDX56-201ENST00000258772 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 SLC50A1Q9BRV3 221 aa11.76□□□□□ -0.53
DDX56-201ENST00000258772 IGHV3-66A0A0C4DH42 116 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 CBY3A6NI87 242 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 G3V318 75 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 K7EP13 123 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 PPBPP02775 128 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 IL17RELQ6ZVW7 336 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 NPFFR1Q9GZQ6 430 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 GAS8-AS1O95177 125 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 MAP1LC3AQ9H492 121 aa11.75□□□□□ -0.53
DDX56-201ENST00000258772 HIVEP3Q5T1R4 2406 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 IGHV3OR16-13A0A075B7E8 117 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 IGHV3-74A0A0B4J1X5 117 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 BOD1L2Q8IYS8 172 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
DDX56-201ENST00000258772 PPIFP30405 207 aaKnown RBP11.74□□□□□ -0.53
DDX56-201ENST00000258772 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
DDX56-201ENST00000258772 CENPVL3A0A0U1RRI6 287 aa11.73□□□□□ -0.53
DDX56-201ENST00000258772 LINC01546A6NGU7 62 aa11.73□□□□□ -0.53
DDX56-201ENST00000258772 EFNA4P52798 201 aa11.73□□□□□ -0.53
DDX56-201ENST00000258772 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
DDX56-201ENST00000258772 LMO4P61968 165 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 AMMECR1LQ6DCA0 310 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 EEF1AKMT3Q96AZ1 226 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 UBTD1Q9HAC8 227 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 C11orf21Q9P2W6 132 aa11.72□□□□□ -0.53
DDX56-201ENST00000258772 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
DDX56-201ENST00000258772 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
DDX56-201ENST00000258772 SEC11AP67812 179 aa11.71□□□□□ -0.53
DDX56-201ENST00000258772 METTL26Q96S19 204 aa11.71□□□□□ -0.53
DDX56-201ENST00000258772 ASH1LQ9NR48 2969 aaKnown RBP11.71□□□□□ -0.53
DDX56-201ENST00000258772 DKK2Q9UBU2 259 aa11.71□□□□□ -0.53
DDX56-201ENST00000258772 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.54
DDX56-201ENST00000258772 FCER1GP30273 86 aa11.71□□□□□ -0.54
DDX56-201ENST00000258772 LEPP41159 167 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms