RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RPS18P62269 152 aaKnown RBP6□□□□□ -1.45
GPNMB-201ENST00000258733 TFF3Q07654 80 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 RUSC1-AS1Q66K80 236 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 COPS9Q8WXC6 57 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 METTL26Q96S19 204 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 PLAC8L1A1L4L8 177 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 ADM5C9JUS6 153 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 TIMM17BO60830 172 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 DEFB121Q5J5C9 76 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 S1PR3Q99500 378 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 CXXC4Q9H2H0 198 aa6□□□□□ -1.45
GPNMB-201ENST00000258733 TRBV10-2A0A0K0K1G8 114 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 GOLGA2P5Q9HBQ8 144 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 UPK2O00526 184 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 PLAUP00749 431 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 C11orf68Q9H3H3 251 aaKnown RBP5.99□□□□□ -1.45
GPNMB-201ENST00000258733 LINC00474Q9P2X8 69 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 MOB4Q9Y3A3 225 aa5.99□□□□□ -1.45
GPNMB-201ENST00000258733 A0A0G2JNJ9 132 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 SRRM4A7MD48 611 aaKnown RBP5.98□□□□□ -1.45
GPNMB-201ENST00000258733 C8orf87E5RJ46 101 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 RNASE2P10153 161 aaKnown RBP5.98□□□□□ -1.45
GPNMB-201ENST00000258733 MSMPQ1L6U9 139 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 NDUFA11Q86Y39 141 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 PLPPR2Q96GM1 343 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 Q9UFV3 132 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 ALPK2Q86TB3 2170 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 A0A0G2JRQ6 117 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 UNQ9165/PRO28630Q6UXU0 137 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 FAM223AQ8IWN6 122 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 RNASE6Q93091 150 aaKnown RBP5.98□□□□□ -1.45
GPNMB-201ENST00000258733 PGLYRP4Q96LB8 373 aa5.98□□□□□ -1.45
GPNMB-201ENST00000258733 HBDP02042 147 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 ZNF137PP52743 207 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 WDR86Q86TI4 376 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 SMCR5Q8TEV8 140 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 CACNA1AO00555 2505 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 A0A1W2PQD3 144 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 WI2-2373I1.2A0A1W2PRP0 233 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 ATXN8Q156A1 80 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 C2orf82Q6UX34 121 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 GFRALQ6UXV0 394 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 SRXN1Q9BYN0 137 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 R4GMQ9 66 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 DNAH12Q6ZR08 3092 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 MED12Q93074 2177 aa5.97□□□□□ -1.45
GPNMB-201ENST00000258733 IFI27P40305 119 aaPredicted RBP5.96□□□□□ -1.45
GPNMB-201ENST00000258733 MRPS36P82909 103 aaKnown RBP5.96□□□□□ -1.45
GPNMB-201ENST00000258733 CFHR3Q02985 330 aa5.96□□□□□ -1.45
GPNMB-201ENST00000258733 KISS1Q15726 138 aa5.96□□□□□ -1.45
GPNMB-201ENST00000258733 C6orf223Q8N319 242 aa5.96□□□□□ -1.45
GPNMB-201ENST00000258733 TM2D3Q9BRN9 247 aa5.96□□□□□ -1.45
GPNMB-201ENST00000258733 SLC50A1Q9BRV3 221 aa5.96□□□□□ -1.45
GPNMB-201ENST00000258733 TRBV7-1A0A0A6YYK4 115 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 IGHV1OR15-9A0A0B4J2B8 117 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 PIGBOS1A0A0B4J2F0 54 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 ZNF714Q96N38 554 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-201ENST00000258733 EDDM3BP56851 147 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 KRTAP27-1Q3LI81 207 aa5.96□□□□□ -1.46
GPNMB-201ENST00000258733 TRBV19A0A075B6N1 114 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 IQCF6A8MYZ5 107 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 PAX8Q06710 450 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 TWIST1Q15672 202 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 BEAN1Q3B7T3 259 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 Q6ZRM9 215 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 FGFBP3Q8TAT2 258 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 Q9H3A6 140 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 ZNF492Q9P255 531 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 CXorf51AA0A1B0GTR3 108 aa5.95□□□□□ -1.46
GPNMB-201ENST00000258733 RBM3P98179 157 aaKnown RBP5.95□□□□□ -1.46
GPNMB-201ENST00000258733 A0A1B0GWA3 101 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 Q8N7P7 452 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 KLHDC9Q8NEP7 349 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 NUP37Q8NFH4 326 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 SPATA3Q8NHX4 192 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 LTBP2Q14767 1821 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 IGHV1-58A0A0C4DH39 117 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 CCKP06307 115 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 CCL5P13501 91 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 DAD1P61803 113 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 KLF16Q9BXK1 252 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-201ENST00000258733 TAC3Q9UHF0 121 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
GPNMB-201ENST00000258733 TRBV5-4A0A0C4DH59 114 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 IGHG2P01859 326 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 SPINT3P49223 89 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 ZNF542PQ5EBM4 170 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 LOC101059948A0A1B0GTJ6 334 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 LGALS3P17931 250 aaKnown RBP5.93□□□□□ -1.46
GPNMB-201ENST00000258733 ZNF818PQ6ZRF7 136 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 PRO1854Q9UHT4 67 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 KIAA0100Q14667 2235 aaKnown RBP5.93□□□□□ -1.46
GPNMB-201ENST00000258733 MED13Q9UHV7 2174 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 FER1L5A0AVI2 2057 aa5.93□□□□□ -1.46
GPNMB-201ENST00000258733 FXYD7P58549 80 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms