RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SLX1AQ9BQ83 275 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 KAAG1Q9UBP8 84 aa6.91□□□□□ -1.3
PTCD3-201ENST00000254630 MRAPQ8TCY5 172 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 VOPP1Q96AW1 172 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 ADCYAP1P18509 176 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 WT1-ASQ06250 92 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 GAGE2AQ6NT46 116 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 IGHV1-24A0A0C4DH33 117 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 CCL24O00175 119 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 SPRNQ5BIV9 151 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 C9orf66Q5T8R8 295 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 IGLV3-1P01715 115 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 FXYD5Q96DB9 178 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
PTCD3-201ENST00000254630 PRR25Q96S07 402 aa6.9□□□□□ -1.3
PTCD3-201ENST00000254630 HOXD3P31249 432 aaPredicted RBP6.9□□□□□ -1.31
PTCD3-201ENST00000254630 HLA-DRB4P13762 266 aa6.9□□□□□ -1.31
PTCD3-201ENST00000254630 Q0VG73 95 aa6.9□□□□□ -1.31
PTCD3-201ENST00000254630 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.31
PTCD3-201ENST00000254630 HLA-DRB4X5D2U9 266 aa6.9□□□□□ -1.31
PTCD3-201ENST00000254630 MDC1Q14676 2089 aaKnown RBP6.9□□□□□ -1.31
PTCD3-201ENST00000254630 SNHG12Q9BXW3 62 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 SRSF2Q01130 221 aaKnown RBP6.89□□□□□ -1.31
PTCD3-201ENST00000254630 C2orf66Q6UXQ4 117 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 C1orf147Q96MC9 270 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-201ENST00000254630 ZFAND6Q6FIF0 208 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 IGFL2Q6UWQ7 119 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 PFN2P35080 140 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 FOXE3Q13461 319 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 CTSZQ9UBR2 303 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 KLF2Q9Y5W3 355 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-201ENST00000254630 LTBP2Q14767 1821 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 WT1P19544 449 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-201ENST00000254630 CLPSL2Q6UWE3 100 aa6.89□□□□□ -1.31
PTCD3-201ENST00000254630 MRPL53Q96EL3 112 aaKnown RBP6.89□□□□□ -1.31
PTCD3-201ENST00000254630 C22orf46C9J442 243 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
PTCD3-201ENST00000254630 V9GYV3 84 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 SPINK8P0C7L1 97 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 KRTAP27-1Q3LI81 207 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 STPG4Q8N801 248 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 NPBQ8NG41 125 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 F5P12259 2224 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 RBMY1FQ15415 496 aaKnown RBP6.88□□□□□ -1.31
PTCD3-201ENST00000254630 RSPO1Q2MKA7 263 aaPredicted RBP6.88□□□□□ -1.31
PTCD3-201ENST00000254630 SDHAF1A6NFY7 115 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 LTAP01374 205 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 IGHV4-38-2P0DP08 117 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 MRPL52Q86TS9 123 aaKnown RBP6.88□□□□□ -1.31
PTCD3-201ENST00000254630 OR11H6Q8NGC7 330 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 SLURP1P55000 103 aa6.88□□□□□ -1.31
PTCD3-201ENST00000254630 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
PTCD3-201ENST00000254630 IGHV4-30-2A0A087WSY4 118 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 C18orf32Q8TCD1 76 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 DEFB136Q30KP8 78 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 IGFBPL1Q8WX77 278 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 RBAKDNA6NC62 111 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 LHBP01229 141 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 ZNF48Q96MX3 618 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-201ENST00000254630 A0A1B0GUS0 222 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 HERVK_113P63121 156 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 PRSS29PA6NIE9 313 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 MPV17L2Q567V2 206 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 C11orf53Q8IXP5 236 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 CFHR4Q92496 578 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 A0A0J9YY99 117 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 C9JAW5 83 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 ANGP03950 147 aaKnown RBP6.87□□□□□ -1.31
PTCD3-201ENST00000254630 ADORA2A-AS1P86434 159 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 TP53BP1Q12888 1972 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-201ENST00000254630 RHOHQ15669 191 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 ASPHD1Q5U4P2 390 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 LURAP1LQ8IV03 231 aa6.87□□□□□ -1.31
PTCD3-201ENST00000254630 NCKAP5O14513 1909 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 H3BMM0 161 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 NDUFS7O75251 213 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 C16orf74Q96GX8 76 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 DYNAPQ8N1N2 210 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 C17orf77Q96MU5 243 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 U3KQE9 123 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 IGHV4-61A0A0C4DH41 118 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 CGB7P0DN87 165 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 OCIAD2Q56VL3 154 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 SIGLEC8Q9NYZ4 499 aa6.86□□□□□ -1.31
PTCD3-201ENST00000254630 HLA-DMBP28068 263 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 SLAQ13239 276 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 APRG1Q8IVJ8 170 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 PYGO2Q9BRQ0 406 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 POLR3KQ9Y2Y1 108 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-201ENST00000254630 FREM3P0C091 2139 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
PTCD3-201ENST00000254630 PRSS57Q6UWY2 283 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms