RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 SLC22A18ASQ8N1D0 253 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 MLST8Q9BVC4 326 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 SLC25A16P16260 332 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 PLNP26678 52 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 TMEM258P61165 79 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 ODF3Q96PU9 254 aa6.07□□□□□ -1.44
USP29-201ENST00000254181 TMEM178BH3BS89 294 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 IGHG4P01861 327 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 IGHV4-34P06331 123 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 HLA-DMBP28068 263 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 RSPO1Q2MKA7 263 aaPredicted RBP6.06□□□□□ -1.44
USP29-201ENST00000254181 NSUN5P1Q3KNT7 163 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 CEMP1Q6PRD7 247 aaPredicted RBP6.06□□□□□ -1.44
USP29-201ENST00000254181 LINC00305Q7Z4B0 112 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 ZNF492Q9P255 531 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 SVILO95425 2214 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 SYNJ2BPP57105 145 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 LYZL1Q6UWQ5 148 aa6.06□□□□□ -1.44
USP29-201ENST00000254181 A0A1W2PQD3 144 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 ATOX1O00244 68 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 MORN5Q5VZ52 161 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 AAED1Q7RTV5 226 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 TRAV8-3A0A0A6YYJ7 113 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 TRAV3A0A0B4J244 114 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 SHISA9B4DS77 424 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 LGALS9O00182 355 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 NDUFC2O95298 119 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 GHRHP01286 108 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 IFI6P09912 130 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 GP9P14770 177 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 UBE2E1P51965 193 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 ERHP84090 104 aaKnown RBP6.05□□□□□ -1.44
USP29-201ENST00000254181 MRPL51Q4U2R6 128 aaKnown RBP6.05□□□□□ -1.44
USP29-201ENST00000254181 LINC00322Q6ZN03 302 aaPredicted RBP6.05□□□□□ -1.44
USP29-201ENST00000254181 UBE2E2Q96LR5 201 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 PLXNB1O43157 2135 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 MYCNOSP40205 109 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 CRIP2P52943 208 aaPredicted RBP6.05□□□□□ -1.44
USP29-201ENST00000254181 FAM104BQ5XKR9 115 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 NDUFA11Q86Y39 141 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 Q8N7P7 452 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 Q9H3A6 140 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 PROK2Q9HC23 129 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 RPUSD1Q9UJJ7 312 aaKnown RBP6.05□□□□□ -1.44
USP29-201ENST00000254181 PYGO1Q9Y3Y4 419 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 U3KQE9 123 aa6.05□□□□□ -1.44
USP29-201ENST00000254181 TRBV7-3A0A075B6L6 115 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 NPC2P61916 151 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 RPS21P63220 83 aaKnown RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 HOXA4Q00056 320 aaPredicted RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 LY6DQ14210 128 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 MLANAQ16655 118 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 FAM53AQ6NSI3 398 aaPredicted RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 PIP4P1Q86T03 277 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 FOXS1O43638 330 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 LIFP15018 202 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 LGALS3P17931 250 aaKnown RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 APOC4P55056 127 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 C9orf139Q6ZV77 190 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 PIP4P2Q8N4L2 257 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 THADAQ6YHU6 1953 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 FREM1Q5H8C1 2179 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 OVOL1O14753 267 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 HOXD3P31249 432 aaPredicted RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 EFNA4P52798 201 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 CIRBPQ14011 172 aaKnown RBP6.04□□□□□ -1.44
USP29-201ENST00000254181 CADP27708 2225 aa6.04□□□□□ -1.44
USP29-201ENST00000254181 SRRM4A7MD48 611 aaKnown RBP6.03□□□□□ -1.44
USP29-201ENST00000254181 LINC00473A8K010 186 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 IGHG3P01860 377 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 TCRAP04437 139 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
USP29-201ENST00000254181 PSPNO60542 156 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 CFC1BP0CG36 223 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 CFC1P0CG37 223 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 GATA1P15976 413 aaPredicted RBP6.03□□□□□ -1.44
USP29-201ENST00000254181 SUB1P53999 127 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP29-201ENST00000254181 FOXF2Q12947 444 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 ITLN1Q8WWA0 313 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 FOXB1Q99853 325 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 RNF186Q9NXI6 227 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 HHLA3Q9XRX5 114 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 TNS1Q9HBL0 1735 aaKnown RBP6.03□□□□□ -1.44
USP29-201ENST00000254181 A0A096LNJ9 63 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 C12orf77C9JDV5 145 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 FAM27BQ5VT28 67 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 KLHL30-AS1Q8NEE0 82 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 C9orf85Q96MD7 179 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 COL16A1Q07092 1604 aaPredicted RBP6.03□□□□□ -1.44
USP29-201ENST00000254181 ADAMTS9Q9P2N4 1935 aa6.03□□□□□ -1.44
USP29-201ENST00000254181 INS-IGF2F8WCM5 200 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 ATP5G1P05496 136 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 UBE2D3P61077 147 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 LYZP61626 148 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 UBE2D2P62837 147 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 SPRNQ5BIV9 151 aa6.02□□□□□ -1.45
USP29-201ENST00000254181 LINC00596Q86U02 117 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms