RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 ZNF705AQ6ZN79 300 aaPredicted RBP15.77■□□□□ 0.12
SLC25A39-201ENST00000225308 IGF2BP2-AS1Q96M15 143 aa15.77■□□□□ 0.12
SLC25A39-201ENST00000225308 PGPA6NDG6 321 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 CT45A10P0DMU9 189 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 ERCC8Q13216 396 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 AGPAT4-IT1Q9H0P7 198 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 PPP1R14DQ9NXH3 145 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 TRAV12-2A0A075B6T6 113 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 A0A0J9YWU9 116 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 AMBPP02760 352 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 CDKN1BP46527 198 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 CSN1S1P47710 185 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 C9orf47Q6ZRZ4 202 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 C1orf158Q8N1D5 194 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 ODF3Q96PU9 254 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 VGLL1Q99990 258 aa15.76■□□□□ 0.11
SLC25A39-201ENST00000225308 KIR3DS1Q14943 382 aa15.75■□□□□ 0.11
SLC25A39-201ENST00000225308 Q8NAQ8 132 aa15.75■□□□□ 0.11
SLC25A39-201ENST00000225308 RXFP4Q8TDU9 374 aa15.75■□□□□ 0.11
SLC25A39-201ENST00000225308 GGTLC3B5MD39 225 aa15.74■□□□□ 0.11
SLC25A39-201ENST00000225308 DIRC3C9JPN6 131 aa15.74■□□□□ 0.11
SLC25A39-201ENST00000225308 PPT1P50897 306 aa15.74■□□□□ 0.11
SLC25A39-201ENST00000225308 RBAKDNA6NC62 111 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 INSP01308 110 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 PMS2P11Q13670 270 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 CMTM2Q8TAZ6 248 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 LINC00477Q96M19 166 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 GNG13Q9P2W3 67 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 TENM2Q9NT68 2774 aa15.73■□□□□ 0.11
SLC25A39-201ENST00000225308 IGHV3OR16-12A0A075B7B8 117 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 A0A1W2PRE2 83 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 RBMY1A1P0DJD3 496 aaKnown RBP15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 RBMY1CP0DJD4 496 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 MIFP14174 115 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 UBE2G2P60604 165 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 RBMY1FQ15415 496 aaKnown RBP15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 ARL6IP6Q8N6S5 226 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 FAM19A4Q96LR4 140 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 IGHV4-28A0A0C4DH34 117 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 SLC25A5P05141 298 aaKnown RBP15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 TSPOP30536 169 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 GNG5P63218 68 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 TMEM78Q5T7P6 136 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 C11orf68Q9H3H3 251 aaKnown RBP15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 MANBALQ9NQG1 85 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 RPH3ALQ9UNE2 315 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 GOLT1BQ9Y3E0 138 aa15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 YTHDF2Q9Y5A9 579 aaKnown RBP15.72■□□□□ 0.11
SLC25A39-201ENST00000225308 DEFB4AO15263 64 aa15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 SUMO1P63165 101 aaKnown RBP15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 C5orf17Q8NAS9 161 aa15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 Q8TAT8 98 aa15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 NEU1Q99519 415 aa15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 ZNF492Q9P255 531 aa15.71■□□□□ 0.11
SLC25A39-201ENST00000225308 FAM74A7A6NL05 159 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 PAGE4O60829 102 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 IFNA1P01562 189 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 LEPP41159 167 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 GFI1BQ5VTD9 330 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 ARL2-SNX15V9GYD0 113 aa15.7■□□□□ 0.1
SLC25A39-201ENST00000225308 GOLT1AQ6ZVE7 132 aa15.69■□□□□ 0.1
SLC25A39-201ENST00000225308 KLLNB2CW77 178 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 J3KRW8 73 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 CRISP2P16562 243 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 ZNF138P52744 262 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 CST9LP1Q5W188 147 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 TMEM208Q9BTX3 173 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 NKX6-2Q9C056 277 aaPredicted RBP15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 RBFOX3A6NFN3 312 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 TCRAP04437 139 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 BCL2P10415 239 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 ZFAND2AQ8N6M9 145 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 MUC7Q8TAX7 377 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 FAM210AQ96ND0 272 aa15.68■□□□□ 0.1
SLC25A39-201ENST00000225308 TRAV8-1A0A0A6YYK1 113 aa15.67■□□□□ 0.1
SLC25A39-201ENST00000225308 SMIM9A6NGZ8 99 aa15.67■□□□□ 0.1
SLC25A39-201ENST00000225308 TAGLN2P37802 199 aaKnown RBP15.67■□□□□ 0.1
SLC25A39-201ENST00000225308 TMEM256Q8N2U0 113 aa15.67■□□□□ 0.1
SLC25A39-201ENST00000225308 EPDR1Q9UM22 224 aa15.67■□□□□ 0.1
SLC25A39-201ENST00000225308 PRR9Q5T870 116 aa15.66■□□□□ 0.1
SLC25A39-201ENST00000225308 C20orf144Q9BQM9 153 aa15.66■□□□□ 0.1
SLC25A39-201ENST00000225308 EIF5A2Q9GZV4 153 aaKnown RBP15.66■□□□□ 0.1
SLC25A39-201ENST00000225308 VAX2Q9UIW0 290 aa15.66■□□□□ 0.1
SLC25A39-201ENST00000225308 TRBV7-9A0A0J9YWB2 115 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 LOC102723971A0A1B0GUV8 181 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 PRM2P04554 102 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 ATP5G3P48201 142 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 TOR2AQ5JU69 321 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 IL17DQ8TAD2 202 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 TXNDC17Q9BRA2 123 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 TRAV12-3A0A0B4J271 114 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 SERTM2A0A1B0GWG4 89 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 C11orf94C9JXX5 98 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 MEF2BQ02080 365 aaPredicted RBP15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 CCDC28AQ8IWP9 274 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 LENEPQ9Y5L5 61 aa15.65■□□□□ 0.1
SLC25A39-201ENST00000225308 C7orf71A4D174 169 aa15.64■□□□□ 0.09
SLC25A39-201ENST00000225308 GPX1P07203 203 aa15.64■□□□□ 0.09
SLC25A39-201ENST00000225308 BTN1A1Q13410 526 aa15.64■□□□□ 0.09
SLC25A39-201ENST00000225308 RRN3P1Q2M238 152 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms