RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FLNCQ14315 2725 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 IGKV2-40A0A087WW87 121 aaPredicted RBP17.17■□□□□ 0.34
CCDC9-201ENST00000221922 IGKV2D-40P01614 121 aaPredicted RBP17.17■□□□□ 0.34
CCDC9-201ENST00000221922 CLEC3BP05452 202 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 ZFAND3Q9H8U3 227 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 SMAD5-AS1Q9Y6J3 95 aa17.17■□□□□ 0.34
CCDC9-201ENST00000221922 TMEM213A2RRL7 107 aa17.16■□□□□ 0.34
CCDC9-201ENST00000221922 IFI27P40305 119 aaPredicted RBP17.16■□□□□ 0.34
CCDC9-201ENST00000221922 USP9XQ93008 2570 aaPredicted RBP17.16■□□□□ 0.34
CCDC9-201ENST00000221922 SPTAN1Q13813 2472 aaKnown RBP17.16■□□□□ 0.34
CCDC9-201ENST00000221922 IGHV4-30-2A0A087WSY4 118 aa17.16■□□□□ 0.34
CCDC9-201ENST00000221922 A0A096LNJ9 63 aa17.16■□□□□ 0.34
CCDC9-201ENST00000221922 TRBV7-1A0A0A6YYK4 115 aa17.16■□□□□ 0.34
CCDC9-201ENST00000221922 D6R8Y8 96 aa17.16■□□□□ 0.34
CCDC9-201ENST00000221922 RELQ04864 619 aaPredicted RBP17.16■□□□□ 0.34
CCDC9-201ENST00000221922 G3V318 75 aa17.15■□□□□ 0.34
CCDC9-201ENST00000221922 H0Y8G0 127 aa17.15■□□□□ 0.34
CCDC9-201ENST00000221922 BVES-AS1Q5T3Y7 98 aa17.15■□□□□ 0.34
CCDC9-201ENST00000221922 SIGLEC8Q9NYZ4 499 aa17.15■□□□□ 0.34
CCDC9-201ENST00000221922 A0A087X0K7 114 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 TMSB15BA0A087X1C1 80 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 NUDT3O95989 172 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 IGHG4P01861 327 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 RPS20P60866 119 aaKnown RBP17.14■□□□□ 0.33
CCDC9-201ENST00000221922 FAM106AQ4KMX7 169 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 C12orf54Q6X4T0 127 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 ORMDL3Q8N138 153 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 CCDC140Q96MF4 163 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 PRELID3AQ96N28 172 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 TRAV40A0A0B4J280 105 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 AMN1Q8IY45 258 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 ATP6V0BQ99437 205 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 PMCHL2Q9BQD1 86 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 MEGF9Q9H1U4 602 aa17.14■□□□□ 0.33
CCDC9-201ENST00000221922 TIMM8BQ9Y5J9 83 aaPredicted RBP17.14■□□□□ 0.33
CCDC9-201ENST00000221922 IGHV3-35A0A0C4DH35 117 aa17.13■□□□□ 0.33
CCDC9-201ENST00000221922 NCR2O95944 276 aa17.13■□□□□ 0.33
CCDC9-201ENST00000221922 CLEC19AQ6UXS0 136 aa17.13■□□□□ 0.33
CCDC9-201ENST00000221922 IGHV3OR16-10A0A075B7F0 116 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 LINC01548A6NM66 108 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 BUB3O43684 328 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 LOXL1Q08397 574 aaPredicted RBP17.12■□□□□ 0.33
CCDC9-201ENST00000221922 MRPL51Q4U2R6 128 aaKnown RBP17.12■□□□□ 0.33
CCDC9-201ENST00000221922 ZFYVE26Q68DK2 2539 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 COX8AP10176 69 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 BMI1P35226 326 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 CRIP2P52943 208 aaPredicted RBP17.12■□□□□ 0.33
CCDC9-201ENST00000221922 SRSF2Q01130 221 aaKnown RBP17.12■□□□□ 0.33
CCDC9-201ENST00000221922 PIFOQ8TCI5 191 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 VGLL1Q99990 258 aa17.12■□□□□ 0.33
CCDC9-201ENST00000221922 COL12A1Q99715 3063 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 MSMBP08118 114 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 IGLC6P0CF74 106 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 ZNF80P51504 273 aaPredicted RBP17.11■□□□□ 0.33
CCDC9-201ENST00000221922 DSCR9P59020 149 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 HIST1H1AQ02539 215 aaPredicted RBP17.11■□□□□ 0.33
CCDC9-201ENST00000221922 ZNF575Q86XF7 245 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 DPF1Q92782 380 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 IGHV3OR16-8A0A075B7F1 116 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 ATP5G2Q06055 141 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 BRD3OSQ6XYD6 125 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 TMEM219Q86XT9 240 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 DEFB125Q8N687 156 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 SLC50A1Q9BRV3 221 aa17.11■□□□□ 0.33
CCDC9-201ENST00000221922 TRAV41A0A0B4J266 112 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 LOC389332A0A1B0GUA5 103 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 TAX1BP3O14907 124 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 PRB1P04280 392 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 FER1L6-AS1Q8NA97 138 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 Q8TAT8 98 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 PSMG3-AS1Q96PY0 264 aa17.1■□□□□ 0.33
CCDC9-201ENST00000221922 FAM223BA6NKX1 122 aa17.09■□□□□ 0.33
CCDC9-201ENST00000221922 FAM223AQ8IWN6 122 aa17.09■□□□□ 0.33
CCDC9-201ENST00000221922 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
CCDC9-201ENST00000221922 METTL26Q96S19 204 aa17.09■□□□□ 0.33
CCDC9-201ENST00000221922 C19orf54Q5BKX5 351 aa17.09■□□□□ 0.33
CCDC9-201ENST00000221922 CLPSL1A2RUU4 121 aa17.08■□□□□ 0.33
CCDC9-201ENST00000221922 IGHV4-38-2P0DP08 117 aa17.08■□□□□ 0.33
CCDC9-201ENST00000221922 CBY1Q9Y3M2 126 aa17.08■□□□□ 0.33
CCDC9-201ENST00000221922 MUC21A0A0G2JKD1 596 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 MUC21A0A140T8X8 626 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 RBAKDNA6NC62 111 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 HLA-DMBP28068 263 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 LGALS9BQ3B8N2 356 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 MUC21Q5SSG8 566 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 IGFL4Q6B9Z1 124 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 LGALS9CQ6DKI2 356 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 CNFNQ9BYD5 112 aa17.08■□□□□ 0.32
CCDC9-201ENST00000221922 TWIST1Q15672 202 aa17.07■□□□□ 0.32
CCDC9-201ENST00000221922 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.07■□□□□ 0.32
CCDC9-201ENST00000221922 C2orf91Q6ZV80 131 aa17.07■□□□□ 0.32
CCDC9-201ENST00000221922 OR8A1Q8NGG7 326 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 NPFFR1Q9GZQ6 430 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 MYO18BQ8IUG5 2567 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 B4DSR2 109 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 K7EP13 123 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 HBDP02042 147 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 CKS2P33552 79 aa17.06■□□□□ 0.32
CCDC9-201ENST00000221922 NPYP01303 97 aa17.05■□□□□ 0.32
CCDC9-201ENST00000221922 ZNF843Q8N446 348 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms