RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 TMEM14CQ9P0S9 112 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 SDHAF1A6NFY7 115 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 CEACAM8P31997 349 aaPredicted RBP14.23□□□□□ -0.13
EXTL3-201ENST00000220562 CDKN1BP46527 198 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 ZNF134P52741 427 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 THAP8Q8NA92 274 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 NCOR1P1Q9H4R4 102 aa14.23□□□□□ -0.13
EXTL3-201ENST00000220562 WT1-ASQ06250 92 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 LRRK1Q38SD2 2015 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 TCF20Q9UGU0 1960 aaKnown RBP14.22□□□□□ -0.13
EXTL3-201ENST00000220562 A8MWP6 167 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 IGFL3Q6UXB1 125 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 ZC2HC1AQ96GY0 325 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 RPL32P62910 135 aaKnown RBP14.22□□□□□ -0.13
EXTL3-201ENST00000220562 LINC00311Q8N616 119 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 TMEM243Q9BU79 118 aa14.22□□□□□ -0.13
EXTL3-201ENST00000220562 MYLKQ15746 1914 aa14.21□□□□□ -0.13
EXTL3-201ENST00000220562 MMP23AO75900 390 aa14.21□□□□□ -0.13
EXTL3-201ENST00000220562 IGLV3-9A0A075B6K5 115 aa14.21□□□□□ -0.13
EXTL3-201ENST00000220562 NKAPP1Q8N9T2 125 aa14.21□□□□□ -0.13
EXTL3-201ENST00000220562 HLA-DRB4P13762 266 aa14.21□□□□□ -0.14
EXTL3-201ENST00000220562 Q71RC1 249 aaPredicted RBP14.21□□□□□ -0.14
EXTL3-201ENST00000220562 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.14
EXTL3-201ENST00000220562 CR1LQ2VPA4 569 aa14.21□□□□□ -0.14
EXTL3-201ENST00000220562 SOCS3O14543 225 aa14.2□□□□□ -0.14
EXTL3-201ENST00000220562 SIGLEC8Q9NYZ4 499 aa14.2□□□□□ -0.14
EXTL3-201ENST00000220562 Q6ZWC4 215 aa14.2□□□□□ -0.14
EXTL3-201ENST00000220562 ARTNQ5T4W7 220 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 A0A096LPF7 62 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 NXPH4O95158 308 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 IGLV1-44P01699 117 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 FXYD5Q96DB9 178 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 C20orf144Q9BQM9 153 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 APOC4P55056 127 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 FAM231DQ6ZW35 169 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 ICE1Q9Y2F5 2266 aa14.19□□□□□ -0.14
EXTL3-201ENST00000220562 E9PQ18 207 aa14.18□□□□□ -0.14
EXTL3-201ENST00000220562 RBMY1FQ15415 496 aaKnown RBP14.18□□□□□ -0.14
EXTL3-201ENST00000220562 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
EXTL3-201ENST00000220562 C9orf118A6NHY6 69 aa14.18□□□□□ -0.14
EXTL3-201ENST00000220562 IGHV7-4-1A0A0J9YVY3 117 aa14.18□□□□□ -0.14
EXTL3-201ENST00000220562 NPYP01303 97 aa14.18□□□□□ -0.14
EXTL3-201ENST00000220562 VOPP1Q96AW1 172 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 TMEM126AQ9H061 195 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 TSC2P49815 1807 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 J3QLI3 93 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 SUMO4Q6EEV6 95 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 YLPM1P49750 1951 aaKnown RBP14.17□□□□□ -0.14
EXTL3-201ENST00000220562 HOXB4P17483 251 aaPredicted RBP14.17□□□□□ -0.14
EXTL3-201ENST00000220562 MORN5Q5VZ52 161 aa14.17□□□□□ -0.14
EXTL3-201ENST00000220562 OR11H6Q8NGC7 330 aa14.16□□□□□ -0.14
EXTL3-201ENST00000220562 MGAMO43451 1857 aa14.16□□□□□ -0.14
EXTL3-201ENST00000220562 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
EXTL3-201ENST00000220562 WDR81Q562E7 1941 aa14.16□□□□□ -0.14
EXTL3-201ENST00000220562 RNASE13Q5GAN3 156 aaKnown RBP14.16□□□□□ -0.14
EXTL3-201ENST00000220562 RSPO1Q2MKA7 263 aaPredicted RBP14.16□□□□□ -0.14
EXTL3-201ENST00000220562 LGALS9BQ3B8N2 356 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 LGALS9CQ6DKI2 356 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 NDUFA12Q9UI09 145 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 CLPSL2Q6UWE3 100 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 CEND1Q8N111 149 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 WIPF3A6NGB9 483 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 IGLC1P0CG04 106 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 FAM215AQ9Y5M1 114 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 PHF3Q92576 2039 aaKnown RBP14.15□□□□□ -0.14
EXTL3-201ENST00000220562 FGF6P10767 208 aa14.15□□□□□ -0.14
EXTL3-201ENST00000220562 MRPL35Q9NZE8 188 aaKnown RBP14.15□□□□□ -0.14
EXTL3-201ENST00000220562 VWC2Q2TAL6 325 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 C17orf77Q96MU5 243 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 RSPO3Q9BXY4 272 aaPredicted RBP14.14□□□□□ -0.15
EXTL3-201ENST00000220562 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 COX8AP10176 69 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 IGF2BP2-AS1Q96M15 143 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 SCRT2Q9NQ03 307 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 TRBV20-1A0A075B6N2 111 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 RLFQ13129 1914 aa14.14□□□□□ -0.15
EXTL3-201ENST00000220562 FER1L5A0AVI2 2057 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 HOXD3P31249 432 aaPredicted RBP14.13□□□□□ -0.15
EXTL3-201ENST00000220562 LTAP01374 205 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 IGLC2P0DOY2 106 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 IGLC3P0DOY3 106 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 HLA-DMBP28068 263 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 SMIM2Q9BVW6 85 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 AHCTF1Q8WYP5 2266 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 K7EM74 188 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 INAFM2P0DMQ5 153 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 C10orf91Q5T1B1 145 aa14.13□□□□□ -0.15
EXTL3-201ENST00000220562 PLA2G2CQ5R387 149 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 PRSS29PA6NIE9 313 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 K7EN84 100 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 IGLL1P15814 213 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 CGB3P0DN86 165 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 PLXNA2O75051 1894 aa14.12□□□□□ -0.15
EXTL3-201ENST00000220562 FANCMQ8IYD8 2048 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 CRLF1O75462 422 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 C9orf153Q5TBE3 101 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 KIAA1671Q9BY89 1806 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 K7ERJ3 54 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 GNRH2O43555 120 aa14.11□□□□□ -0.15
EXTL3-201ENST00000220562 HERVK_113P63121 156 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms