RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 RITA1Q96K30 269 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 FABP5P3A8MUU1 101 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 TMEM262E9PQX1 116 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 TMEM200BQ69YZ2 307 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 VCX2Q9H322 139 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 FAM90A27PA6NNH2 459 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 CLEC3BP05452 202 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 HLA-DRB4P13762 266 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 GATA3P23771 443 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 S100A4P26447 101 aaKnown RBP7.94□□□□□ -1.14
CLDN18-201ENST00000183605 PLNP26678 52 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 CFAP161Q6P656 301 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 C1orf162Q8NEQ5 155 aaPredicted RBP7.94□□□□□ -1.14
CLDN18-201ENST00000183605 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 HLA-DRB4X5D2U9 266 aa7.94□□□□□ -1.14
CLDN18-201ENST00000183605 REV3LO60673 3130 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 VSTM5A8MXK1 200 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 IGHV1-46P01743 117 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 XGP55808 180 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
CLDN18-201ENST00000183605 MSMPQ1L6U9 139 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 SIGLEC15Q6ZMC9 328 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 BEX4Q9NWD9 120 aaPredicted RBP7.93□□□□□ -1.14
CLDN18-201ENST00000183605 ONECUT1Q9UBC0 465 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 TRIOBPQ9H2D6 2365 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 TRAV26-2A0A0B4J265 109 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 FSTL3O95633 263 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 DLX1P56177 255 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 SRSF1Q07955 248 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLDN18-201ENST00000183605 MALRD1Q5VYJ5 2156 aa7.93□□□□□ -1.14
CLDN18-201ENST00000183605 SHISA9B4DS77 424 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 H7C1H1 209 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 LYPD1Q8N2G4 141 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 WI2-2373I1.2A0A1W2PRP0 233 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 MGPP08493 103 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 HERVK_113P61574 105 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 PRR25Q96S07 402 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 GAS8-AS1O95177 125 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 C1orf122Q6ZSJ8 110 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 PHLDA1Q8WV24 401 aaPredicted RBP7.92□□□□□ -1.14
CLDN18-201ENST00000183605 ERG28Q9UKR5 140 aa7.92□□□□□ -1.14
CLDN18-201ENST00000183605 ZNF688P0C7X2 276 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 ZFP2Q6ZN57 461 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 DTX2Q86UW9 622 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 DEFB123Q8N688 67 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 Q8N8P6 123 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 SIGLEC9Q9Y336 463 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 TNRC6BQ9UPQ9 1833 aaKnown RBP7.91□□□□□ -1.14
CLDN18-201ENST00000183605 DSCAMO60469 2012 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 MDS2Q8NDY4 140 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 A0A087WX48 190 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 C9JAW5 83 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 EMP1P54849 157 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 HERV-K104P63124 156 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 PVRIGQ6DKI7 326 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 TEN1Q86WV5 123 aa7.91□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE12JA6NER3 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE7O76087 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 LHBP01229 141 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 IGKV1-17P01599 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE12FP0CL80 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE12GP0CL81 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE12IP0CL82 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 SLC25A16P16260 332 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 GAGE4Q13068 117 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 PRADC1Q9BSG0 188 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 ZNF71Q9NQZ8 489 aaPredicted RBP7.9□□□□□ -1.14
CLDN18-201ENST00000183605 INS-IGF2F8WCM5 200 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 K7EM74 188 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 CRYGCP07315 174 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 MFAP4P55083 255 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 RAX2Q96IS3 184 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 SLC25A15Q9Y619 301 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 U3KQK5 164 aa7.9□□□□□ -1.14
CLDN18-201ENST00000183605 SPTA1P02549 2419 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 F8VRH5 84 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 M0R381 172 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 ERCC8Q13216 396 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 C3orf36Q3SXR2 165 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 KIR2DL4Q99706 377 aa7.9□□□□□ -1.15
CLDN18-201ENST00000183605 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 H3BRN7 92 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 IGLV1-44P01699 117 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 IGLV2-23P01705 113 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 ZNF491Q8N8L2 437 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 SPTBN2O15020 2390 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 C16orf97H3BN30 126 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 RAB1BQ9H0U4 201 aa7.89□□□□□ -1.15
CLDN18-201ENST00000183605 IGHV3-49A0A0A0MS15 119 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms