RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 CACNA1HO95180 2353 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 TIMP3P35625 211 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 UBE2E1P51965 193 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 CT83Q5H943 113 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 C4orf51C9J302 202 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 DEFB131AP59861 70 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 PLXNA3P51805 1871 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 EPOPA6NHQ4 379 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 PLA2G2AP14555 144 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 WFDC11Q8NEX6 87 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 LIME1Q9H400 295 aa10.11□□□□□ -0.79
HS3ST1-201ENST00000002596 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 NUP210Q8TEM1 1887 aaPredicted RBP10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 DENND4CQ5VZ89 1909 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 HIST1H2BLQ99880 126 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 IGHV1-18A0A0C4DH31 117 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 IGKV1D-43A0A0B4J1Z2 117 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 IGKV3D-7A0A0C4DH55 119 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 WIPF2Q8TF74 440 aaPredicted RBP10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 UNQ6494/PRO21346Q6UXR6 183 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 TM2D2Q9BX73 214 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 SPRR3Q9UBC9 169 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
HS3ST1-201ENST00000002596 IGKV1D-13A0A0B4J2D9 117 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 F6UB75 175 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 IGKV1-13P0DP09 117 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 SLC25A48Q6ZT89 311 aaKnown RBP10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 TRBV6-7A0A0A0MS04 114 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 UBE2CO00762 179 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 TRPT1Q86TN4 253 aaKnown RBP10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 ZNRF2Q8NHG8 242 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
HS3ST1-201ENST00000002596 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 ZC2HC1BQ5TFG8 222 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 HEPN1Q6WQI6 88 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 FBLIM1Q8WUP2 373 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 TRGV9Q99603 122 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 UTF1Q5T230 341 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 RNF5Q99942 180 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 B5MCH6 92 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 ZNF664Q8N3J9 261 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 CFHR4Q92496 578 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 DSCAML1Q8TD84 2053 aa10.08□□□□□ -0.8
HS3ST1-201ENST00000002596 TMEM200BQ69YZ2 307 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 ORMDL1Q9P0S3 153 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV1-8P0DP01 117 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV1-3A0A0C4DH29 117 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 RNF222A6NCQ9 220 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 TMEM178BH3BS89 294 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 AMN1Q8IY45 258 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 C3orf22Q8N5N4 141 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 COX7B2Q8TF08 81 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 FANCD2OSQ96PS1 177 aa10.07□□□□□ -0.8
HS3ST1-201ENST00000002596 CXCL1P09341 107 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 RPRMLQ8N4K4 120 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 DAZ1Q9NQZ3 744 aaKnown RBP10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 IGLL5B9A064 214 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 EFNA2O43921 213 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 WISP3O95389 354 aaPredicted RBP10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 IGLV10-54A0A075B6I4 117 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 IGKV1D-12P01611 117 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 IGLV3-19P01714 112 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 PLXNA4Q9HCM2 1894 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
HS3ST1-201ENST00000002596 ZNF362Q5T0B9 420 aaPredicted RBP10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 LINC01551Q86U37 167 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 WBP1Q96G27 269 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 LYPD6Q86Y78 171 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 SIP14410 1827 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 C5orf64Q2M2E5 130 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 ETV2O00321 342 aaPredicted RBP10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 TMEM105Q8N8V8 129 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 VSIG2Q96IQ7 327 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 BUB1B-PAK6H3BSN5 160 aa10.05□□□□□ -0.8
HS3ST1-201ENST00000002596 HIST3H2BBQ8N257 126 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV4-31P0DP07 118 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 SPATA31B1PQ5VZV4 182 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 LYPD1Q8N2G4 141 aa10.04□□□□□ -0.8
HS3ST1-201ENST00000002596 TRAV13-2A0A0B4J235 113 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms