RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 SstP60041 116 aa8.73□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Q8BTC1 67 aa8.73□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Nkg7Q99PA5 165 aa8.73□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Mrpl13Q9D1P0 178 aaKnown RBP8.73□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Plxna4Q80UG2 1893 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Zfp456B2RUK9 458 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Cdx1P18111 268 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Myoz1Q9JK37 296 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Ighv5-17A0A075B5R1 117 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 C2cd4aE9Q861 334 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Fabp6P51162 128 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Lsm11Q8BUV6 361 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Wipi1Q8R3E3 446 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Olfr816Q8VFU2 312 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Cisd1Q91WS0 108 aaKnown RBP8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Zfp36l2P23949 484 aaKnown RBP8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 MiaQ61865 130 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Pef1Q8BFY6 275 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Rbm14Q8C2Q3 669 aaKnown RBP8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Neurl3Q8CJC5 254 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Plppr2Q8VCY8 343 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Olfr1404Q8VGE1 313 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Chac2Q9CQG1 178 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Olfr894Q9EQB2 313 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 RttnQ8R4Y8 2226 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Tmem131O70472 1877 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Znf385cA2A5E6 429 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Zfp493E9Q1L8 384 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 A630076J17RikJ3QQ32 107 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Wnt5aP22725 380 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Col8a1Q00780 744 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Gm614Q3V2K1 191 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Psg27Q497W2 474 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Btf3Q64152 204 aaKnown RBP8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Zfp874bQ7M6X2 447 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Mrpl51Q9CPY1 128 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Rnase4Q9JJH1 148 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Bcl2l10Q9Z0F3 191 aa8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Urb1Q571H0 2274 aaKnown RBP8.72□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Gm21775J3KMK6 180 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Esp3J3QN49 87 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 CfdP03953 259 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Hspb7P35385 169 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Slc25a35Q5SWT3 300 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 CrhQ8CIT0 187 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Cby1Q9D1C2 127 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Vmn1r46Q9EQ45 309 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Tmem183Q9JJB9 375 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Psg18B2RSG7 476 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Gosr1O88630 250 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Fam222bQ6P539 562 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Zfp455Q7M6X9 461 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Olfr1202Q8VF98 309 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Sft2d3Q9CSV6 209 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Fam162bQ9CX19 157 aa8.71□□□□□ -1.01
Ccdc40-201ENSMUST00000035935 Plxna2P70207 1894 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Trav18A0A075B656 109 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1293-psA0A1L1SVB5 326 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1328B1ARV2 313 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm6904E9PVF1 202 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Wnt2bO70283 389 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 PnkdQ69ZP3 385 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Insig2Q91WG1 225 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm12728V9GX31 77 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 H2-M5A7VMS3 348 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Klk1b22P15948 259 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mpv17P19258 176 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ubald1Q6P3B2 176 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Q6PIU9 354 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Znf250Q7TNU6 535 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Zfp799Q8BHK4 648 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1350Q8VF34 308 aa8.71□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Igkv14-126A0A075B5K0 117 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Zfp108E9Q8I5 642 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 LfngO09010 378 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Slc25a47Q6IS41 310 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Habp2Q8K0D2 558 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 AamdcQ8R0P4 122 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ndufb3Q9CQZ6 104 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1458A0A1L1SSD5 307 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 BC049730Q810N3 246 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ankrd55Q8BLD6 626 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Tmprss5Q9ER04 455 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1191-ps1A0A1L1STD5 311 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 GzmbP04187 247 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 TgfaP48030 159 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ldlrad2Q3V0V0 142 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Aqp11Q8BHH1 271 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr873Q8VFJ0 319 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr983Q8VG90 315 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr1256Q8VGP1 306 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Ubtd1Q91WB7 227 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Cldn16Q925N4 235 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Tmem262D3Z338 116 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Olfr15P23275 312 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Dnase2P56542 353 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Fam219bQ14DQ1 197 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 RalyQ64012 312 aaKnown RBP8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Mgst3Q9CPU4 153 aa8.7□□□□□ -1.02
Ccdc40-201ENSMUST00000035935 Gm10439A2AJU2 433 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms