RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Slc37a1Q8R070 531 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Scgb1b27Q91WB5 92 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Mrpl3Q99N95 348 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Fancd2osQ9D4K4 178 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Tmem225Q9D9S2 230 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr1248A0A1L1SSZ5 307 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 StomP54116 284 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Nhlh2Q64221 135 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 GfralQ6SJE0 393 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr91Q7TRL3 312 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr968Q8VFN4 314 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr1228Q8VGM9 323 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Gtf3aQ8VHT7 364 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Tmem183Q9JJB9 375 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Egr4Q9WUF2 478 aa13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Dnajc13D4AFX7 2248 aaKnown RBP13.64□□□□□ -0.23
Shh-201ENSMUST00000002708 Trav4-2A0A075B638 110 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm5129F6YHA9 99 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Fgf7P36363 194 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Pax5Q02650 391 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 SspnQ62147 216 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Rph3alQ768S4 302 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr875Q7TRE5 310 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr335-psQ7TRY6 312 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Ido2Q8R0V5 405 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Zcchc10Q9CX48 178 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Mrps11Q9DCA2 191 aaKnown RBP13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr753-ps1A0A140LHN3 164 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm35060A0A140LIV7 231 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr1104A2AVB5 310 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr918E9PVZ7 325 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Syngr2O55101 224 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm10384Q3UQ87 92 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Zic3Q62521 466 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Btf3Q64152 204 aaKnown RBP13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Cxxc4Q6NXI8 198 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr874Q7TRE6 310 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr358Q7TRY5 330 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 TirapQ99JY1 241 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Cds2Q99L43 444 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Prr15Q9D1T5 122 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 H60bB1B212 251 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Vamp3P63024 103 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Tpt1P63028 172 aaKnown RBP13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr1362Q5SZZ8 308 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Spock1Q62288 442 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Znrf2Q71FD5 238 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Vmn1r171Q9EPS6 316 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 P2ry6Q9ERK9 328 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Tnfrsf13bQ9ET35 249 aa13.63□□□□□ -0.23
Shh-201ENSMUST00000002708 Trav6-1A0A075B5Z8 112 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Ighv1-36A0A0A6YXT2 117 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Ifitm7G3X9Z2 141 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Fabp4P04117 132 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr58Q7TRF6 309 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr368Q8VF22 327 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr641Q8VGX6 312 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Zfp931A2AHM2 298 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Adamts17E9Q4D1 1122 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Tnfrsf1aP25118 454 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Bmpr1bP36898 502 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Cnn1Q08091 297 aaKnown RBP13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Pate4Q09098 99 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Zfp941Q3URY5 674 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr924Q7TRB8 308 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Spsb4Q8R5B6 273 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 Foxj2Q9ES18 565 aa13.62□□□□□ -0.23
Shh-201ENSMUST00000002708 D830044I16RikA0A1D5RM53 117 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 CckarO08786 436 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Tnfsf11O35235 316 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Tnfsf12O54907 249 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Sox15P43267 231 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Klf14Q19A41 325 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm10803Q3TZS6 135 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Phf13Q8K2W6 296 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm20773A0A0A6YXW2 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm20807A0A0A6YXX7 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr284A0A0U1RP76 321 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Tarm1B6A8R8 288 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Lbhd2G3UW55 114 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm20873J3QMQ9 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm20795J3QP49 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm21310J3QQ23 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Asgr2P24721 301 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm21440Q3TTD8 232 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Spred3Q6P6N5 408 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Lax1Q8BHB3 407 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Vwc2Q8C8N3 324 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Q9CQM1 111 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Sumo3Q9Z172 110 aa13.61□□□□□ -0.23
Shh-201ENSMUST00000002708 Trav5-4A0A075B652 114 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr912A0A1L1SSS5 310 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 A0A286YCQ8 80 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 ClcP97400 68 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Crebl2Q32M00 123 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr1009Q8VFK1 314 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 2200002J24RikQ9D807 110 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Wdr31Q9JHB4 367 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Trem3Q9JKE1 183 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Pus1Q9WU56 423 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 124.1 ms