RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CHEK1O14757 476 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 CD5LO43866 347 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 TCL1AP56279 114 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 LCN12Q6JVE5 192 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 TSKUQ8WUA8 353 aa13.25□□□□□ -0.29
PHGDH-208ENST00000641023 AKR1D1P51857 326 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 FOXE3Q13461 319 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 C10orf99Q6UWK7 81 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 LINC00322Q6ZN03 302 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-208ENST00000641023 DUX5Q96PT3 197 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 RPP21Q9H633 154 aaKnown RBP13.24□□□□□ -0.29
PHGDH-208ENST00000641023 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 CT83Q5H943 113 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 Q8N2B8 174 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 GBGT1Q8N5D6 347 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
PHGDH-208ENST00000641023 FLNAP21333 2647 aaKnown RBP13.23□□□□□ -0.29
PHGDH-208ENST00000641023 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
PHGDH-208ENST00000641023 ITPR2Q14571 2701 aa13.23□□□□□ -0.29
PHGDH-208ENST00000641023 TLN2Q9Y4G6 2542 aa13.23□□□□□ -0.29
PHGDH-208ENST00000641023 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
PHGDH-208ENST00000641023 RPLP1P05386 114 aaKnown RBP13.23□□□□□ -0.29
PHGDH-208ENST00000641023 COX19Q49B96 90 aa13.23□□□□□ -0.29
PHGDH-208ENST00000641023 SAPCD1Q5SSQ6 148 aa13.23□□□□□ -0.29
PHGDH-208ENST00000641023 DAZ1Q9NQZ3 744 aaKnown RBP13.23□□□□□ -0.29
PHGDH-208ENST00000641023 A8MWL6 223 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 CT45A10P0DMU9 189 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 C8orf86Q6ZUL3 223 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 CLEC5AQ9NY25 188 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-208ENST00000641023 SPINK4O60575 86 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-208ENST00000641023 PRB4P10163 310 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-208ENST00000641023 HOXA5P20719 270 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 HLA-DMBP28068 263 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 ZC2HC1AQ96GY0 325 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 GNB1LQ9BYB4 327 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 YAE1D1Q9NRH1 226 aa13.22□□□□□ -0.29
PHGDH-208ENST00000641023 ZNF705FA8MVS1 300 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-208ENST00000641023 KRTAP1-1Q07627 177 aa13.21□□□□□ -0.29
PHGDH-208ENST00000641023 WDR73Q6P4I2 378 aa13.21□□□□□ -0.29
PHGDH-208ENST00000641023 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
PHGDH-208ENST00000641023 NEU1Q99519 415 aa13.21□□□□□ -0.29
PHGDH-208ENST00000641023 NPIPB6E9PJ23 425 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 K7EMT4 169 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 CBLN1P23435 193 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 IGHV7-4-1A0A0J9YVY3 117 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 HIGD1CA8MV81 97 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 SNURFLB1AK76 121 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 MT-ND6P03923 174 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 CDX1P47902 265 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-208ENST00000641023 RNF182Q8N6D2 247 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 MRPL53Q96EL3 112 aaKnown RBP13.2□□□□□ -0.3
PHGDH-208ENST00000641023 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 GFRA4Q9GZZ7 299 aa13.2□□□□□ -0.3
PHGDH-208ENST00000641023 FAM231BA6NCW3 169 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 SMUG1Q53HV7 270 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 RASL11AQ6T310 242 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 PRR25Q96S07 402 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 UFC1Q9Y3C8 167 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 LGALS1P09382 135 aaKnown RBP13.19□□□□□ -0.3
PHGDH-208ENST00000641023 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
PHGDH-208ENST00000641023 COX8CQ7Z4L0 72 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 ASCL2Q99929 193 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 VGLL1Q99990 258 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 NDFIP1Q9BT67 221 aa13.19□□□□□ -0.3
PHGDH-208ENST00000641023 MRPL18Q9H0U6 180 aaKnown RBP13.19□□□□□ -0.3
PHGDH-208ENST00000641023 SCGB2A2Q13296 93 aa13.18□□□□□ -0.3
PHGDH-208ENST00000641023 Q71RC1 249 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-208ENST00000641023 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
PHGDH-208ENST00000641023 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
PHGDH-208ENST00000641023 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
PHGDH-208ENST00000641023 SMPXQ9UHP9 88 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 XKRY2A2RUG3 117 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 DNAJC9-AS1A6NH13 148 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 BMI1P35226 326 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 CRIP1P50238 77 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 RAB4BP61018 213 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
PHGDH-208ENST00000641023 SONP18583 2426 aaKnown RBP13.16□□□□□ -0.3
PHGDH-208ENST00000641023 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 HLA-DQA1P01909 254 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 S100A8P05109 93 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
PHGDH-208ENST00000641023 WIPF2Q8TF74 440 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-208ENST00000641023 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms