RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NHLH1Q02575 133 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 CDSNQ15517 529 aa11.48□□□□□ -0.57
SCARB2-221ENST00000640341 RNASE8Q8TDE3 154 aaKnown RBP11.48□□□□□ -0.57
SCARB2-221ENST00000640341 NDPQ00604 133 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 FOXE3Q13461 319 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 TWIST1Q15672 202 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
SCARB2-221ENST00000640341 NPIPB6E9PJ23 425 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 ORM1P02763 201 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 C18orf15Q96N68 181 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 TMEM14CQ9P0S9 112 aa11.47□□□□□ -0.57
SCARB2-221ENST00000640341 ECSCRQ19T08 205 aa11.46□□□□□ -0.57
SCARB2-221ENST00000640341 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
SCARB2-221ENST00000640341 MFAP4P55083 255 aa11.46□□□□□ -0.58
SCARB2-221ENST00000640341 UBE2V1Q13404 147 aa11.46□□□□□ -0.58
SCARB2-221ENST00000640341 ORAOV1Q8WV07 137 aa11.46□□□□□ -0.58
SCARB2-221ENST00000640341 NAA38Q9BRA0 125 aaKnown RBP11.46□□□□□ -0.58
SCARB2-221ENST00000640341 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.58
SCARB2-221ENST00000640341 SH2D1AO60880 128 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 TIMD4Q96H15 378 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 PRELID3AQ96N28 172 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 ARPC1AQ92747 370 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 ZNF207O43670 478 aaKnown RBP11.45□□□□□ -0.58
SCARB2-221ENST00000640341 NDUFS7O75251 213 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 PVRIGQ6DKI7 326 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 DYNAPQ8N1N2 210 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 VGLL1Q99990 258 aa11.45□□□□□ -0.58
SCARB2-221ENST00000640341 CEACAM3P40198 252 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 CKS2P33552 79 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 FANCD2OSQ96PS1 177 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 MSRB1Q9NZV6 116 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 ZFHX3Q15911 3703 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 GPR183P32249 361 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 CACNG7P62955 275 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 VKORC1Q9BQB6 163 aa11.44□□□□□ -0.58
SCARB2-221ENST00000640341 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.582e-8■■■□□ 17.7
SCARB2-221ENST00000640341 ERCC8Q13216 396 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 BVES-AS1Q5T3Y7 98 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 ZNF747Q9BV97 191 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 RAB1BQ9H0U4 201 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 SIGLEC8Q9NYZ4 499 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
SCARB2-221ENST00000640341 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
SCARB2-221ENST00000640341 J3KRW8 73 aa11.42□□□□□ -0.58
SCARB2-221ENST00000640341 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-221ENST00000640341 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-221ENST00000640341 EVI2AP22794 236 aa11.42□□□□□ -0.58
SCARB2-221ENST00000640341 NMUP48645 174 aa11.42□□□□□ -0.58
SCARB2-221ENST00000640341 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
SCARB2-221ENST00000640341 ZNF80P51504 273 aaPredicted RBP11.42□□□□□ -0.58
SCARB2-221ENST00000640341 SCRT2Q9NQ03 307 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 VMO1Q7Z5L0 202 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 CFHR4Q92496 578 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 ANKRD39Q53RE8 183 aa11.41□□□□□ -0.58
SCARB2-221ENST00000640341 TAX1BP3O14907 124 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 GAS8-AS1O95177 125 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 RHOGP84095 191 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 MRPL51Q4U2R6 128 aaKnown RBP11.4□□□□□ -0.58
SCARB2-221ENST00000640341 C12orf54Q6X4T0 127 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 LINC00527Q9UJ94 153 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 HIVEP3Q5T1R4 2406 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 NPYP01303 97 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 FER1L6-AS1Q8NA97 138 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 RAB37Q96AX2 223 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 THYN1Q9P016 225 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
SCARB2-221ENST00000640341 RPL7P18124 248 aaKnown RBP11.4□□□□□ -0.59
SCARB2-221ENST00000640341 PRR25Q96S07 402 aa11.4□□□□□ -0.59
SCARB2-221ENST00000640341 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 MRPS12O15235 138 aaKnown RBP11.39□□□□□ -0.59
SCARB2-221ENST00000640341 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 WI2-2373I1.2A0A1W2PRP0 233 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 OVOL3O00110 214 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 CLEC3BP05452 202 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
SCARB2-221ENST00000640341 COTL1Q14019 142 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 ZNF562Q6V9R5 426 aa11.39□□□□□ -0.59
SCARB2-221ENST00000640341 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 F8W735 103 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-221ENST00000640341 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-221ENST00000640341 C15orf32Q32M92 178 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 LINC01545Q5VT33 79 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 RNF5Q99942 180 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 VPS25Q9BRG1 176 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 G3V318 75 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 CTSGP08311 255 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 S100A7AQ86SG5 101 aa11.38□□□□□ -0.59
SCARB2-221ENST00000640341 A0A096LNJ9 63 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms