RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 VAMP3Q15836 100 aa12.1□□□□□ -0.47
RHOXF1P3-203ENST00000640298 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
RHOXF1P3-203ENST00000640298 SAPCD1Q5SSQ6 148 aa12.1□□□□□ -0.47
RHOXF1P3-203ENST00000640298 SIGLEC8Q9NYZ4 499 aa12.1□□□□□ -0.47
RHOXF1P3-203ENST00000640298 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
RHOXF1P3-203ENST00000640298 TMEM213A2RRL7 107 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 DPF1Q92782 380 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 M0R1W7 72 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 C21orf62Q9NYP8 219 aa12.09□□□□□ -0.47
RHOXF1P3-203ENST00000640298 A0A087X0K7 114 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FBLL1A6NHQ2 334 aaKnown RBP12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FAM90A27PA6NNH2 459 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PRTN3P24158 256 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 GPR183P32249 361 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 RBX1P62877 108 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 HES1Q14469 280 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FBXL19-AS1Q494R0 122 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 AMN1Q8IY45 258 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ARPC1AQ92747 370 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PRELID3AQ96N28 172 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PRR25Q96S07 402 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 C2orf91Q6ZV80 131 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGFBPL1Q8WX77 278 aa12.08□□□□□ -0.48
RHOXF1P3-203ENST00000640298 TMSB15BA0A087X1C1 80 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CD5LO43866 347 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 NDPQ00604 133 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 KLRD1Q13241 179 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 NCOR2Q9Y618 2525 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGKV2-40A0A087WW87 121 aaPredicted RBP12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGKV2D-40P01614 121 aaPredicted RBP12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 THYN1Q9P016 225 aa12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LY6HO94772 140 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PAX8Q06710 450 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 MRPL51Q4U2R6 128 aaKnown RBP12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 OR2T8A6NH00 312 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 KLRB1Q12918 225 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 TIMD4Q96H15 378 aa12.06□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CCL21O00585 134 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 EGR2P11161 476 aaPredicted RBP12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CTSGP08311 255 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FGF6P10767 208 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 BMI1P35226 326 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 Q8N6K4 173 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGHG4P01861 327 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CCDC144NLQ6NUI1 221 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ZNF575Q86XF7 245 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 OR1N2Q8NGR9 330 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 SMAD5-AS1Q9Y6J3 95 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 DCHS2Q6V1P9 2916 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 PCP4P48539 62 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ERASQ7Z444 233 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 LRBAP50851 2863 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 NCBP2LA6PVI3 153 aaKnown RBP12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 HBDP02042 147 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ZNF80P51504 273 aaPredicted RBP12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 FOXE3Q13461 319 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 EBI3Q14213 229 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 RABAC1Q9UI14 185 aa12.04□□□□□ -0.48
RHOXF1P3-203ENST00000640298 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 SCGB2A1O75556 95 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 SRSF2Q01130 221 aaKnown RBP12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ANKRD39Q53RE8 183 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 C1orf122Q6ZSJ8 110 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 DYNAPQ8N1N2 210 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 VGLL1Q99990 258 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 ABCA4P78363 2273 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 IGHV3-23P01764 117 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CKS2P33552 79 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CDKN1BP46527 198 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 SEC11AP67812 179 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 Q8TAT8 98 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 NPFFR1Q9GZQ6 430 aa12.03□□□□□ -0.48
RHOXF1P3-203ENST00000640298 COL6A6A6NMZ7 2263 aa12.02□□□□□ -0.48
RHOXF1P3-203ENST00000640298 CBY3A6NI87 242 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 SNAI2O43623 268 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 NPYP01303 97 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 CDSNQ15517 529 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 TWIST1Q15672 202 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 AMMECR1LQ6DCA0 310 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
RHOXF1P3-203ENST00000640298 TMEM97Q5BJF2 176 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms