RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TP53TG3Q9ULZ0 132 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 LY96Q9Y6Y9 160 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 TCF20Q9UGU0 1960 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 DPH3P1Q9H4G8 78 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 SPINT3P49223 89 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 RBM3P98179 157 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 RPL18Q07020 188 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 C19orf54Q5BKX5 351 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF689Q96CS4 500 aaPredicted RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 DEFB126Q9BYW3 111 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 IGHG2P01859 326 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 HMGN2P05204 90 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 FXYD2P54710 66 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 MFAP2P55001 183 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 RPS21P63220 83 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 C1orf140Q5VVS0 124 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00643Q86TS7 51 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 SLC25A45Q8N413 288 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 VSIG2Q96IQ7 327 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 NPYP01303 97 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 IGHV3-9P01782 118 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 S100A4P26447 101 aaKnown RBP3.44□□□□□ -1.86
SCN3A-209ENST00000639244 HBBP68871 147 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 QRFPP83859 136 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM230Q96A57 120 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 FAM19A4Q96LR4 140 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 GLIPR2Q9H4G4 154 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
SCN3A-209ENST00000639244 GFERP55789 205 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 DPTQ07507 201 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 STPG3Q8N7X2 389 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 PFN4Q8NHR9 129 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 ABCA12Q86UK0 2595 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 HLA-DMBP28068 263 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 EBLN2Q6P2I7 272 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00482Q8N8I6 264 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 CNEP1R1Q8N9A8 125 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 TRBV20OR9-2A0A075B6H5 130 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 F5H697 171 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 LGALS9O00182 355 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 CSRP3P50461 194 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 FAM222AQ5U5X8 452 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 PRR13Q9NZ81 148 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 COL18A1P39060 1754 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 BPTFQ12830 3046 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 ZGLP1P0C6A0 271 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 TWIST1Q15672 202 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 Q6ZS49 121 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 OR8A1Q8NGG7 326 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 HHLA3Q9XRX5 114 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 IZUMO1RA6ND01 250 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 NDUFC1O43677 76 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 VSIG8P0DPA2 414 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM92Q6UXU6 159 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM14AQ9Y6G1 99 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 HBDP02042 147 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 CNRIP1Q96F85 164 aaPredicted RBP3.43□□□□□ -1.86
SCN3A-209ENST00000639244 ZCCHC24Q8N2G6 241 aaKnown RBP3.43□□□□□ -1.86
SCN3A-209ENST00000639244 DEPPQ9NTK1 212 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 TIMM9Q9Y5J7 89 aa3.43□□□□□ -1.86
SCN3A-209ENST00000639244 SUMO2P61956 95 aaKnown RBP3.42□□□□□ -1.86
SCN3A-209ENST00000639244 ATXN8Q156A1 80 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 CLLU1OSQ5K130 101 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM207Q6UWW9 146 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF714Q96N38 554 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 SPINK2P20155 84 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 CFPP27918 469 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 UBE2BP63146 152 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF721Q8TF20 911 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
SCN3A-209ENST00000639244 TLN1Q9Y490 2541 aaKnown RBP3.42□□□□□ -1.86
SCN3A-209ENST00000639244 C9JCJ5 164 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 K7ESM1 405 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 LIM2P55344 173 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 CIRBPQ14011 172 aaKnown RBP3.42□□□□□ -1.86
SCN3A-209ENST00000639244 STPG1Q5TH74 334 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 DYNLRB2Q8TF09 96 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 FANCD2OSQ96PS1 177 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 CCL26Q9Y258 94 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 C17orf100A8MU93 164 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 NDUFS7O75251 213 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 COX6CP09669 75 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 GYPEP15421 78 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 PI3P19957 117 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 RPS27P42677 84 aaKnown RBP3.42□□□□□ -1.86
SCN3A-209ENST00000639244 Q1RN00 199 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 UPK2O00526 184 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 INAFM2P0DMQ5 153 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 LINC01553A4QN01 128 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 DYNLT3P51808 116 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 Q9H8V8 135 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 FAM208BQ5VWN6 2430 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 FGF11Q92914 225 aa3.42□□□□□ -1.86
SCN3A-209ENST00000639244 A0A1B0GWA3 101 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 OXTP01178 125 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PRR20EP86478 221 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PRR20CP86479 221 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PRR20DP86480 221 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PRR20BP86481 221 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms