RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 IGHG3P01860 377 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 IGHV1-24A0A0C4DH33 117 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 CDKN1BP46527 198 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 LINC00479Q96M42 142 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 CFHR2P36980 270 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 NDPQ00604 133 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 MPDZO75970 2070 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 TMEM213A2RRL7 107 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 SYNJ2BPP57105 145 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 LYPD1Q8N2G4 141 aa13.93□□□□□ -0.18
HNRNPU-217ENST00000638952 NDUFC2O95298 119 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 ANXA2RQ3ZCQ2 193 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 TSC2P49815 1807 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 RS1O15537 224 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 IGKV1-16P04430 117 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 PFN1P07737 140 aaKnown RBP13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 ZNF524Q96C55 264 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 SVILO95425 2214 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 TMEM219Q86XT9 240 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 PRO1854Q9UHT4 67 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 PTPRDP23468 1912 aa13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 C1orf147Q96MC9 270 aaPredicted RBP13.92□□□□□ -0.18
HNRNPU-217ENST00000638952 BUB1B-PAK6H3BSN5 160 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 TMEM141Q96I45 108 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 TRAV25A0A0B4J276 109 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 CRLF1O75462 422 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 MMP23AO75900 390 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 AMTNQ6UX39 209 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 LYPD2Q6UXB3 125 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 C2orf66Q6UXQ4 117 aa13.91□□□□□ -0.18
HNRNPU-217ENST00000638952 TINCRA0A1B0GVN0 87 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 PAX9P55771 341 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 ZNRD1Q9P1U0 126 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 ZNF726P1Q15940 193 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 Q8N8P6 123 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 DSCR8Q96T75 97 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 SIGLEC9Q9Y336 463 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 TRPT1Q86TN4 253 aaKnown RBP13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 IGHG4P01861 327 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 PFN2P35080 140 aa13.9□□□□□ -0.18
HNRNPU-217ENST00000638952 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 NTN5Q8WTR8 489 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 A0A0G2JNJ9 132 aa13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 Q9UFV3 132 aa13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 SPACA3Q8IXA5 215 aa13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 RNF5Q99942 180 aa13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 ARHGEF17Q96PE2 2063 aaPredicted RBP13.89□□□□□ -0.19
HNRNPU-217ENST00000638952 FNDC10F2Z333 226 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 CYYR1Q96J86 154 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 IGHV2-5P01817 119 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 TCF20Q9UGU0 1960 aaKnown RBP13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 LGALS9BQ3B8N2 356 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 LGALS9CQ6DKI2 356 aa13.88□□□□□ -0.19
HNRNPU-217ENST00000638952 C5orf64Q2M2E5 130 aa13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 ZNF492Q9P255 531 aa13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 UBE2DNLQ8IWF7 75 aa13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 C11orf44Q8N8P7 122 aa13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 TAL2Q16559 108 aa13.87□□□□□ -0.19
HNRNPU-217ENST00000638952 PRSS46E5RG02 174 aa13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 CACNA1DQ01668 2161 aa13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 MBD3L4A6NDZ8 208 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 MBD3L3A6NE82 208 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 MBD3L5A6NJ08 208 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 CCL25O15444 150 aa13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 HLA-DMBP28068 263 aa13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 MBD3L2Q8NHZ7 208 aaPredicted RBP13.86□□□□□ -0.19
HNRNPU-217ENST00000638952 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 IGKV1-39P01597 117 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 IGKV1D-39P04432 117 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 SCRT2Q9NQ03 307 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 ETV2O00321 342 aaPredicted RBP13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 PRB1P04280 392 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 SAP30O75446 220 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 IL17RELQ6ZVW7 336 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 C8orf49Q96NF6 230 aa13.85□□□□□ -0.19
HNRNPU-217ENST00000638952 TRBV7-1A0A0A6YYK4 115 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 MINOS1Q5TGZ0 78 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 NDUFA12Q9UI09 145 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 MINOS1-NBL1R4GNA1 71 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 A0A1W2PPI3 338 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 hADV29S1A0JD25 119 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 PSCAO43653 123 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 COL8A2P25067 703 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 NBL1P41271 181 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 C12orf74Q32Q52 190 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 PLXNA4Q9HCM2 1894 aa13.84□□□□□ -0.19
HNRNPU-217ENST00000638952 CEACAM8P31997 349 aaPredicted RBP13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 TMEM243Q9BU79 118 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 SDK2Q58EX2 2172 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms