RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.27
SCARB2-210ENST00000638567 NOTCH2Q04721 2471 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 PRTN3P24158 256 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 PDE6HQ13956 83 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 CD300EQ496F6 205 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-210ENST00000638567 NPFFR1Q9GZQ6 430 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 ZNF815PA8K554 130 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 M0R1W7 72 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 ERCC8Q13216 396 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 LINC00311Q8N616 119 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
SCARB2-210ENST00000638567 COX6B1P14854 86 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
SCARB2-210ENST00000638567 C8orf49Q96NF6 230 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-210ENST00000638567 C3orf36Q3SXR2 165 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 IGHV1-24A0A0C4DH33 117 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 CD5LO43866 347 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 MAJINQ3KP22 176 aa13.32□□□□□ -0.28
SCARB2-210ENST00000638567 LY6DQ14210 128 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 KIR3DS1Q14943 382 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 TDRG1Q3Y452 100 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
SCARB2-210ENST00000638567 NDUFB8O95169 186 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 SUMO2P61956 95 aaKnown RBP13.31□□□□□ -0.28
SCARB2-210ENST00000638567 ODF3L1Q8IXM7 274 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 IGKV3OR2-268A0A0C4DH90 116 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 IGFL3Q6UXB1 125 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 OVOL1O14753 267 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 NPFFO15130 113 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 BRD3OSQ6XYD6 125 aa13.31□□□□□ -0.28
SCARB2-210ENST00000638567 OTOGLQ3ZCN5 2332 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 TMEM75Q8N9X5 138 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 KIR2DL5BA0A0G2JN68 375 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 KIR2DL5BA0A0G2JPC4 375 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 GAGE12BA1L429 117 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 FAM104BQ5XKR9 115 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 KIR2DL5AQ8N109 375 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 UBE2L6O14933 153 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 RRN3P1Q2M238 152 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 THAP8Q8NA92 274 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 DUX3Q96PT4 197 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
SCARB2-210ENST00000638567 EFNA4P52798 201 aa13.29□□□□□ -0.28
SCARB2-210ENST00000638567 MORN5Q5VZ52 161 aa13.29□□□□□ -0.28
SCARB2-210ENST00000638567 MRAP2Q96G30 205 aa13.29□□□□□ -0.28
SCARB2-210ENST00000638567 CHD3Q12873 2000 aaKnown RBP13.29□□□□□ -0.28
SCARB2-210ENST00000638567 C14orf178Q8N769 122 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-210ENST00000638567 VCX2Q9H322 139 aa13.29□□□□□ -0.28
SCARB2-210ENST00000638567 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-210ENST00000638567 LINC01559Q495D7 138 aa13.29□□□□□ -0.28
SCARB2-210ENST00000638567 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
SCARB2-210ENST00000638567 TNFRSF6BO95407 300 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 C9orf139Q6ZV77 190 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 RNF182Q8N6D2 247 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 ZC2HC1AQ96GY0 325 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 TDGF1P13385 188 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 SAA4P35542 130 aa13.28□□□□□ -0.28
SCARB2-210ENST00000638567 ITLN2Q8WWU7 325 aaPredicted RBP13.28□□□□□ -0.28
SCARB2-210ENST00000638567 HAX1O00165 279 aa13.27□□□□□ -0.28
SCARB2-210ENST00000638567 TMEM131Q92545 1883 aa13.27□□□□□ -0.28
SCARB2-210ENST00000638567 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.28
SCARB2-210ENST00000638567 SAMD13Q5VXD3 122 aa13.27□□□□□ -0.28
SCARB2-210ENST00000638567 CTSZQ9UBR2 303 aa13.27□□□□□ -0.28
SCARB2-210ENST00000638567 DYSFO75923 2080 aa13.27□□□□□ -0.28
SCARB2-210ENST00000638567 LHBP01229 141 aa13.27□□□□□ -0.29
SCARB2-210ENST00000638567 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
SCARB2-210ENST00000638567 WISP2O76076 250 aa13.27□□□□□ -0.29
SCARB2-210ENST00000638567 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 C17orf77Q96MU5 243 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 PRR25Q96S07 402 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 PRSS57Q6UWY2 283 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 TMEM14CQ9P0S9 112 aa13.26□□□□□ -0.29
SCARB2-210ENST00000638567 H3BUX3 64 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 ZNF688P0C7X2 276 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 MRPL51Q4U2R6 128 aaKnown RBP13.25□□□□□ -0.29
SCARB2-210ENST00000638567 IGHV3-64A0A075B6Q5 118 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 TRBV7-1A0A0A6YYK4 115 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 PRSS46E5RG02 174 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 Q6ZVH6 145 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 BPESC1Q9GZL8 116 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 ADAMTS9Q9P2N4 1935 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 IGKV1OR2-108A0A075B7D4 117 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 A0A1B0GV72 72 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 TTC32Q5I0X7 151 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 DPH3P1Q9H4G8 78 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 H3BRN7 92 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 GAGE13Q4V321 117 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 SPRY4Q9C004 299 aa13.25□□□□□ -0.29
SCARB2-210ENST00000638567 G3V318 75 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
SCARB2-210ENST00000638567 LINC01587Q99440 93 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms