RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLURP1P55000 103 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 RPL23P62829 140 aaKnown RBP11.65□□□□□ -0.54
CLN6-219ENST00000637329 GNG5P63218 68 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 FOXL1Q12952 345 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 ADIRFQ15847 76 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
CLN6-219ENST00000637329 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
CLN6-219ENST00000637329 OR9G4Q8NGQ1 327 aa11.64□□□□□ -0.55
CLN6-219ENST00000637329 RPH3ALQ9UNE2 315 aa11.64□□□□□ -0.55
CLN6-219ENST00000637329 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 DIRC3C9JPN6 131 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 CCL24O00175 119 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 SOCS3O14543 225 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 TSPAN4O14817 238 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 CBLN1P23435 193 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 TCF24Q7RTU0 167 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 Q86TA4 180 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 C11orf44Q8N8P7 122 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 RPS10P5Q9NQ39 176 aa11.63□□□□□ -0.55
CLN6-219ENST00000637329 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 M0R3E3 92 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 ISLRO14498 428 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 SCO1O75880 301 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 LTAP01374 205 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 FOLR2P14207 255 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
CLN6-219ENST00000637329 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 CTDSP1Q9GZU7 261 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 TMEM242Q9NWH2 141 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 MLXQ9UH92 298 aa11.62□□□□□ -0.55
CLN6-219ENST00000637329 TRAV8-2A0A0B4J237 113 aa11.61□□□□□ -0.55
CLN6-219ENST00000637329 ADARB2-AS1A8MUL3 147 aa11.61□□□□□ -0.55
CLN6-219ENST00000637329 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
CLN6-219ENST00000637329 PSG3Q16557 428 aa11.61□□□□□ -0.55
CLN6-219ENST00000637329 DLX4Q92988 240 aaPredicted RBP11.61□□□□□ -0.55
CLN6-219ENST00000637329 SIGLEC8Q9NYZ4 499 aa11.61□□□□□ -0.55
CLN6-219ENST00000637329 TRAV2A0A0B4J234 112 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 PPP1R2P9O14990 202 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 EDN2P20800 178 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 SRSF2Q01130 221 aaKnown RBP11.6□□□□□ -0.55
CLN6-219ENST00000637329 FLI1Q01543 452 aaPredicted RBP11.6□□□□□ -0.55
CLN6-219ENST00000637329 BAGE2Q86Y30 109 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 DUX3Q96PT4 197 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 TUBA4BQ9H853 241 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
CLN6-219ENST00000637329 TRAV34A0A0B4J273 112 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 CXorf65A6NEN9 183 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 K7EN84 100 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 OVOL1O14753 267 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 IGLV2-11P01706 119 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 IGLV2-8P01709 118 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 ID1P41134 155 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
CLN6-219ENST00000637329 LCN12Q6JVE5 192 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 DCANP1Q8TF63 244 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
CLN6-219ENST00000637329 PGPEP1LA6NFU8 196 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 GCGP01275 180 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 CSN3P07498 182 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 BTN1A1Q13410 526 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 RNF212Q495C1 297 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 ADAMTSL5Q6ZMM2 481 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
CLN6-219ENST00000637329 IGKV2-40A0A087WW87 121 aaPredicted RBP11.57□□□□□ -0.56
CLN6-219ENST00000637329 DNASE2O00115 360 aaPredicted RBP11.57□□□□□ -0.56
CLN6-219ENST00000637329 IGKV2D-40P01614 121 aaPredicted RBP11.57□□□□□ -0.56
CLN6-219ENST00000637329 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 PAFAH1B2P68402 229 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 COX8CQ7Z4L0 72 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 CBLN2Q8IUK8 224 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 TMEM183AQ8IXX5 376 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 DYNLRB2Q8TF09 96 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 MS4A6AQ9H2W1 248 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
CLN6-219ENST00000637329 TRAV8-1A0A0A6YYK1 113 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 H7BYZ3 331 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 K7EQG2 157 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 SNRPD3P62318 126 aaKnown RBP11.56□□□□□ -0.56
CLN6-219ENST00000637329 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 IGFL4Q6B9Z1 124 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 TMEM88Q6PEY1 159 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 FAM231DQ6ZW35 169 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
CLN6-219ENST00000637329 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms