RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
CLN6-217ENST00000636964 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 NCBP2LA6PVI3 153 aaKnown RBP9.11□□□□□ -0.95
CLN6-217ENST00000636964 TCL1AP56279 114 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 PRR20EP86478 221 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 PRR20CP86479 221 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 PRR20DP86480 221 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 PRR20BP86481 221 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 PRR20AP86496 221 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 FXYD3Q14802 87 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 RPEL1Q2QD12 228 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
CLN6-217ENST00000636964 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
CLN6-217ENST00000636964 DOPEY2Q9Y3R5 2298 aa9.11□□□□□ -0.95
CLN6-217ENST00000636964 J3QR89 54 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 MOSP00540 346 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 CX3CL1P78423 397 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 GPR82Q96P67 336 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 SLC25A33Q9BSK2 321 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 ABCA2Q9BZC7 2435 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 ZFHX3Q15911 3703 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 TRAV9-2A0A087WT02 112 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 C2orf70A6NJV1 201 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 TEX22C9J3V5 150 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 INS-IGF2F8WCM5 200 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 NBR2O15453 112 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 MIR17HGQ75NE6 70 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 COL8A1P27658 744 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 Q56UQ5 140 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 C18orf32Q8TCD1 76 aa9.1□□□□□ -0.95
CLN6-217ENST00000636964 IGHV4-30-2A0A087WSY4 118 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 FAM120AOSQ5T036 256 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 MUC21A0A0G2JKD1 596 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 MUC21A0A140T8X8 626 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 TEX48A0A1B0GUV7 120 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 SMIM9A6NGZ8 99 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 RHOBP62745 196 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 MUC21Q5SSG8 566 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
CLN6-217ENST00000636964 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
CLN6-217ENST00000636964 UBR5O95071 2799 aaPredicted RBP9.09□□□□□ -0.95
CLN6-217ENST00000636964 TRBV9A0A0B4J1U6 114 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 FAM181BA6NEQ2 426 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 SAA4P35542 130 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 BVES-AS1Q5T3Y7 98 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 RNF5Q99942 180 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 KLF17Q5JT82 389 aaPredicted RBP9.08□□□□□ -0.96
CLN6-217ENST00000636964 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 URB1-AS1Q96HZ7 61 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 C1QTNF4Q9BXJ3 329 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 NOTCH3Q9UM47 2321 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 FBN2P35556 2912 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 CA1P00915 261 aaPredicted RBP9.08□□□□□ -0.96
CLN6-217ENST00000636964 MORN5Q5VZ52 161 aa9.08□□□□□ -0.96
CLN6-217ENST00000636964 IGKV1D-37A0A075B6S9 117 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 CXorf1O96002 111 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 UBE2E1P51965 193 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 S4R3C0 116 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 TRAV5A0A0B4J249 113 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 SH2D7A6NKC9 451 aaPredicted RBP9.07□□□□□ -0.96
CLN6-217ENST00000636964 C9JCJ5 164 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 IGLV2-8P01709 118 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 SEC61GP60059 68 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 RNASEKQ6P5S7 137 aaKnown RBP9.07□□□□□ -0.96
CLN6-217ENST00000636964 DEFB125Q8N687 156 aa9.07□□□□□ -0.96
CLN6-217ENST00000636964 MCRIP2Q9BUT9 160 aaKnown RBP9.07□□□□□ -0.96
CLN6-217ENST00000636964 F11RQ9Y624 299 aaKnown RBP9.07□□□□□ -0.96
CLN6-217ENST00000636964 GCHFRP30047 84 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 MINOS1Q5TGZ0 78 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 AJUBAQ96IF1 538 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 MINOS1-NBL1R4GNA1 71 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 MYO9AB2RTY4 2548 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 NUDT3O95989 172 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 COX6B1P14854 86 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 PMCHL1Q16048 86 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 CENPWQ5EE01 88 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 BRD3OSQ6XYD6 125 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 NPBQ8NG41 125 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 ZANQ9Y493 2812 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 F5H768 121 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 NDUFA3O95167 84 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 TNFRSF19Q9NS68 423 aa9.06□□□□□ -0.96
CLN6-217ENST00000636964 NDPQ00604 133 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 PQLC2Q6ZP29 291 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 NPFFR1Q9GZQ6 430 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 TCRBV4S1A1TA0A5B7 111 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 MT-ND6P03923 174 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 AMY1AP04745 511 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 ORM2P19652 201 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 EDN2P20800 178 aa9.05□□□□□ -0.96
CLN6-217ENST00000636964 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms