RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RELQ04864 619 aaPredicted RBP11□□□□□ -0.65
CACNA1A-228ENST00000636610 ERCC8Q13216 396 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 RIGQ13278 110 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 RNF182Q8N6D2 247 aa11□□□□□ -0.65
CACNA1A-228ENST00000636610 TMEM189A5PLL7 270 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 PCP4P48539 62 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 TWIST1Q15672 202 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 NDFIP1Q9BT67 221 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 SH2D1AO60880 128 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 ORM1P02763 201 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 CT83Q5H943 113 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 MRPL52Q86TS9 123 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
CACNA1A-228ENST00000636610 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 J3KRW8 73 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 OVOL3O00110 214 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 TNFRSF14Q92956 283 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 LINC00527Q9UJ94 153 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 DOPEY2Q9Y3R5 2298 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 LOC105371242A0A075B767 164 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 C5orf64Q2M2E5 130 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 PRSS57Q6UWY2 283 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 C21orf62Q9NYP8 219 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 TMEM14CQ9P0S9 112 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 GPR183P32249 361 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 NHLH1Q02575 133 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 PVRIGQ6DKI7 326 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
CACNA1A-228ENST00000636610 CRYBG3Q68DQ2 2970 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 SPRY2O43597 315 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 EGR2P11161 476 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 EVI2AP22794 236 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 CSN1S1P47710 185 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 MFAP4P55083 255 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 CFHR4Q92496 578 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 PRELID3AQ96N28 172 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 SIGLEC8Q9NYZ4 499 aa10.97□□□□□ -0.65
CACNA1A-228ENST00000636610 ZNF747Q9BV97 191 aa10.96□□□□□ -0.65
CACNA1A-228ENST00000636610 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
CACNA1A-228ENST00000636610 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-228ENST00000636610 PRAC2D3DTV9 90 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 GATA1P15976 413 aaPredicted RBP10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 ZFP36P26651 326 aaKnown RBP10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 CACNG7P62955 275 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 UBE2V1Q13404 147 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 Q6ZQT7 251 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.66
CACNA1A-228ENST00000636610 PRSS47A8MTI9 375 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 ANKRD39Q53RE8 183 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 ORAOV1Q8WV07 137 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 LINC01548A6NM66 108 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 MRPS12O15235 138 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 CKS2P33552 79 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 TIMD4Q96H15 378 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 CELSR2Q9HCU4 2923 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 CSMD2Q7Z408 3487 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 G3V318 75 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 NPYP01303 97 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 TTTY13Q9BZ97 58 aa10.95□□□□□ -0.66
CACNA1A-228ENST00000636610 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 MRPL51Q4U2R6 128 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 FAM162BQ5T6X4 162 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 RAB1BQ9H0U4 201 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 SCRT2Q9NQ03 307 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 SORL1Q92673 2214 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 A0A096LNJ9 63 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 TAX1BP3O14907 124 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 SFTPCP11686 197 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 NMUP48645 174 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 RHOGP84095 191 aa10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 USP9YO00507 2555 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-228ENST00000636610 IGLV11-55A0A075B6I3 123 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 CTSGP08311 255 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 CEACAM3P40198 252 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 RAB37Q96AX2 223 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 CLEC3BP05452 202 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 PET117Q6UWS5 81 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 PRR25Q96S07 402 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 SMAD5-AS1Q9Y6J3 95 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 POLQO75417 2590 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 WI2-2373I1.2A0A1W2PRP0 233 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 FAM231BA6NCW3 169 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
CACNA1A-228ENST00000636610 RAXQ9Y2V3 346 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms