RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRSS57Q6UWY2 283 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 BCL6BQ8N143 479 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 PRR25Q96S07 402 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 IGLC6P0CF74 106 aa11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 FCER1GP30273 86 aa11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 BSPH1Q075Z2 132 aa11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 RNASE6Q93091 150 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 RALYQ9UKM9 306 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
CACNA1A-220ENST00000635988 GNG7O60262 68 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 EVI2AP22794 236 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 ODF1Q14990 250 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 DYNLRB1Q9NP97 96 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 SMKR1H3BMG3 65 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 ATP5LO75964 103 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 SCGB1A1P11684 91 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 RPL7P18124 248 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 SRSF1Q07955 248 aaKnown RBP eCLIP11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 VGLL1Q99990 258 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 CHAC1Q9BUX1 264 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 HHLA3Q9XRX5 114 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 GPR179Q6PRD1 2367 aa11.6□□□□□ -0.55
CACNA1A-220ENST00000635988 TRIOBPQ9H2D6 2365 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 IGKCP01834 107 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 LEPP41159 167 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 RPL24P83731 157 aaKnown RBP11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 Q6ZS92 163 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 CNFNQ9BYD5 112 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 PRSS1P07477 247 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 FXYD2P54710 66 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 MFAP4P55083 255 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 C1orf122Q6ZSJ8 110 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 C18orf15Q96N68 181 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 TM2D2Q9BX73 214 aa11.59□□□□□ -0.55
CACNA1A-220ENST00000635988 ZNF562Q6V9R5 426 aa11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 SVILO95425 2214 aa11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 J3QR89 54 aa11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
CACNA1A-220ENST00000635988 DPM2O94777 84 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 PRB4P10163 310 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 TAL2Q16559 108 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 GFRALQ6UXV0 394 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 CEND1Q8N111 149 aa11.57□□□□□ -0.56
CACNA1A-220ENST00000635988 TRBV25-1A0A075B6N4 114 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 TEX48A0A1B0GUV7 120 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 NPIPB5A8MRT5 1133 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 F8W1H4 67 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 LY6LH3BQJ8 138 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 SCGB2A1O75556 95 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 TNFRSF6BO95407 300 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 COX7A1P24310 79 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 PHLDA1Q8WV24 401 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 DSPP15924 2871 aaKnown RBP11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 FABP5P3A8MUU1 101 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 NBR2O15453 112 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 FTH1P19P0C7X4 201 aa11.56□□□□□ -0.56
CACNA1A-220ENST00000635988 PPIAL4CA0A0B4J2A2 164 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 DLX1P56177 255 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 KLF17Q5JT82 389 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 SIGMAR1Q99720 223 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 MALRD1Q5VYJ5 2156 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 TIMM23O14925 209 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 ORM1P02763 201 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 Q8N8P6 123 aa11.55□□□□□ -0.56
CACNA1A-220ENST00000635988 E9PLD3 99 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 FOXC2Q99958 501 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 A0A0G2JNJ9 132 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 ZC2HC1BQ5TFG8 222 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 PIP4P1Q86T03 277 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 NPBQ8NG41 125 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 Q9UFV3 132 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 COL6A3P12111 3177 aa11.54□□□□□ -0.56
CACNA1A-220ENST00000635988 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 NDUFA3O95167 84 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 IGF2-ASQ6U949 168 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 FOXI2Q6ZQN5 318 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 Q8TAT8 98 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 TMEM158Q8WZ71 300 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 C21orf62Q9NYP8 219 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 ABCA1O95477 2261 aa11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 PRB3Q04118 309 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-220ENST00000635988 GTSCR1Q86UQ5 136 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms