RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 P01737 135 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 NBEAP1P0C6P0 100 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 PRNTQ86SH4 94 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 MUC15Q8N387 334 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 NPBQ8NG41 125 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 OR11H6Q8NGC7 330 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 IGFBPL1Q8WX77 278 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 NRN1Q9NPD7 142 aa5.69□□□□□ -1.5
CTNNA1-244ENST00000627109 F8P00451 2351 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 NCBP2LA6PVI3 153 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 BMPR1BO00238 502 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 NDUFA3O95167 84 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 TOMM40O96008 361 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 HIST1H1EP10412 219 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 ARF6P62330 175 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 Q6ZN92 141 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 GFRA4Q9GZZ7 299 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 ODF3BA8MYP8 253 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 GPX1P07203 203 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 C11orf71Q6IPW1 123 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 RASL11BQ9BPW5 248 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 ITPR3Q14573 2671 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 TRAV8-1A0A0A6YYK1 113 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 PPIAL4CA0A0B4J2A2 164 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 FAM231BA6NCW3 169 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 PPIAL4GP0DN37 164 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 CTRLP40313 264 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 KCNS1Q96KK3 526 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 RCHY1Q96PM5 261 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 CLEC7AQ9BXN2 247 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 EPDR1Q9UM22 224 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 HIVEP2P31629 2446 aa5.68□□□□□ -1.5
CTNNA1-244ENST00000627109 TMSB15BA0A087X1C1 80 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 MRPS12O15235 138 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 IGLC1P0CG04 106 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 HNRNPA3P51991 378 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 LCN12Q6JVE5 192 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 GOLT1AQ6ZVE7 132 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 FMC1Q96HJ9 113 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 SOX21Q9Y651 276 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 IGHV3-35A0A0C4DH35 117 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 IGLV2-11P01706 119 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 GDF5OSQ5U4N7 250 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 HIGD1AQ9Y241 93 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 IGHV3OR16-8A0A075B7F1 116 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 A0A1W2PS18 150 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 VWC2LB2RUY7 222 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 TFPI2P48307 235 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 PMCHL1Q16048 86 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 LDLRAD2Q5SZI1 272 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 Q71RC1 249 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 COX8CQ7Z4L0 72 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 PPP1R27Q86WC6 154 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 V9GYY9 64 aa5.67□□□□□ -1.5
CTNNA1-244ENST00000627109 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 CCL19Q99731 98 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 ARHGAP32A7KAX9 2087 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 KLF17Q5JT82 389 aaPredicted RBP5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 NIT1Q86X76 327 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 EXOC3-AS1Q8N2X6 119 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 C5orf17Q8NAS9 161 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 NUP35Q8NFH5 326 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 Q9H3A6 140 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 C1RLQ9NZP8 487 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 TEX15Q9BXT5 2789 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 M0R1W7 72 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 NDUFS7O75251 213 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 ZNF324O75467 553 aaPredicted RBP5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 IGHV3-23P01764 117 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 EBI3Q14213 229 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 RBPMS2Q6ZRY4 209 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 Q8N6K4 173 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 OR4F17Q8NGA8 305 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 GPR82Q96P67 336 aa5.66□□□□□ -1.5
CTNNA1-244ENST00000627109 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 MUC21A0A140T8X8 626 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 WI2-2373I1.2A0A1W2PRP0 233 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 A8MWL6 223 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 HTR1DP28221 377 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 FCGR2BP31994 310 aaPredicted RBP5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 UBE2V1Q13404 147 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 MUC21Q5SSG8 566 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 ZNF562Q6V9R5 426 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 LYPD1Q8N2G4 141 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 OR8B3Q8NGG8 313 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 C18orf32Q8TCD1 76 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 SRSF12Q8WXF0 261 aaKnown RBP5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 OR8B2Q96RD0 313 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 OTORQ9NRC9 128 aa5.65□□□□□ -1.5
CTNNA1-244ENST00000627109 K7EIM0 57 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms