RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ZNF503-AS2A6NEH8 195 aa4.55□□□□□ -1.68
ERCC6-213ENST00000624341 ETV2O00321 342 aaPredicted RBP4.55□□□□□ -1.68
ERCC6-213ENST00000624341 WDR86Q86TI4 376 aa4.55□□□□□ -1.68
ERCC6-213ENST00000624341 HELZP42694 1942 aaKnown RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 KIF26AQ9ULI4 1882 aaPredicted RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 A0A1W2PRX2 142 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 TMEM238C9JI98 176 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 LY6HO94772 140 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 GTF3C1Q12789 2109 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 ATXN8Q156A1 80 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 MDS2Q8NDY4 140 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 NUP210Q8TEM1 1887 aaPredicted RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 BDP1A6H8Y1 2624 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 TRAV41A0A0B4J266 112 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 IGHV1-24A0A0C4DH33 117 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RBMY1BA6NDE4 496 aaKnown RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RBMY1EA6NEQ0 496 aaKnown RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 BUB1B-PAK6H3BSN5 160 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 THBDP07204 575 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RBMY1DP0C7P1 496 aaKnown RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RBMY1A1P0DJD3 496 aaKnown RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RBMY1CP0DJD4 496 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 CD59P13987 128 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 LMO1P25800 156 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 LYPD1Q8N2G4 141 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 GFRA4Q9GZZ7 299 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 DYSFO75923 2080 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 CFAP161Q6P656 301 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 DUX4L9Q6RFH8 374 aaPredicted RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 C2orf82Q6UX34 121 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 TEX43Q6ZNM6 134 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 RNF166Q96A37 237 aaPredicted RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 SHANK2-AS3Q9BTD1 123 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 C9JAW5 83 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 K7EP13 123 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 VMO1Q7Z5L0 202 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 C8orf49Q96NF6 230 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 SPAG8Q99932 426 aaPredicted RBP4.54□□□□□ -1.68
ERCC6-213ENST00000624341 PROK2Q9HC23 129 aa4.54□□□□□ -1.68
ERCC6-213ENST00000624341 A0A087WWL8 130 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 Q6ZR03 302 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 TSSC4Q9Y5U2 329 aaPredicted RBP4.53□□□□□ -1.68
ERCC6-213ENST00000624341 PCNX2A6NKB5 2137 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 WNK1Q9H4A3 2382 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.53□□□□□ -1.68
ERCC6-213ENST00000624341 C9orf118A6NHY6 69 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 NUPR1O60356 82 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 FCN3O75636 299 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 DUSP14O95147 198 aaKnown RBP4.53□□□□□ -1.68
ERCC6-213ENST00000624341 GAGE1Q13065 139 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 TDRG1Q3Y452 100 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 NDUFA4L2Q9NRX3 87 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 SMIM27A0A1W2PRY6 76 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 VCYO14598 125 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 CGB7P0DN87 165 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 ZNF134P52741 427 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 C11orf44Q8N8P7 122 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 ZNF492Q9P255 531 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 OBSL1O75147 1896 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 LAMA3Q16787 3333 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 K7EN84 100 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 ITGB1BP1O14713 200 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 BVES-AS1Q5T3Y7 98 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 RNF5Q99942 180 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 SPXQ9BT56 116 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 SPG11Q96JI7 2443 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 TRAV8-3A0A0A6YYJ7 113 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 COX8AP10176 69 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 LINC00158P58513 81 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 MED13Q9UHV7 2174 aa4.53□□□□□ -1.68
ERCC6-213ENST00000624341 CHD3Q12873 2000 aaKnown RBP4.52□□□□□ -1.69
ERCC6-213ENST00000624341 MALP21145 153 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 WT1-ASQ06250 92 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 ZNF562Q6V9R5 426 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 PLEKHB2Q96CS7 222 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 TRGV11A0A075B6L2 103 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 LINC01549A6NIU2 74 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 COL8A2P25067 703 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 CT83Q5H943 113 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 BRD3OSQ6XYD6 125 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 FAM231DQ6ZW35 169 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 C11orf52Q96A22 123 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 SLC25A20O43772 301 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 MMP23AO75900 390 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 IGLV3-1P01715 115 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 SSBP2P81877 361 aaPredicted RBP4.52□□□□□ -1.69
ERCC6-213ENST00000624341 MRPL51Q4U2R6 128 aaKnown RBP4.52□□□□□ -1.69
ERCC6-213ENST00000624341 MORN3Q6PF18 240 aaPredicted RBP4.52□□□□□ -1.69
ERCC6-213ENST00000624341 STHQ8IWL8 128 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 TRBV19A0A075B6N1 114 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 CGB3P0DN86 165 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 SLC25A16P16260 332 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 RPL32P62910 135 aaKnown RBP4.52□□□□□ -1.69
ERCC6-213ENST00000624341 LINC00477Q96M19 166 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 CHCHD5Q9BSY4 110 aa4.52□□□□□ -1.69
ERCC6-213ENST00000624341 C17orf58Q2M2W7 97 aa4.51□□□□□ -1.69
ERCC6-213ENST00000624341 COA6Q5JTJ3 125 aaKnown RBP4.51□□□□□ -1.69
ERCC6-213ENST00000624341 AMTNQ6UX39 209 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms