RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 LYZL4Q96KX0 146 aa6.55□□□□□ -1.36
CDKL5-206ENST00000623610 SRXN1Q9BYN0 137 aa6.55□□□□□ -1.36
CDKL5-206ENST00000623610 V9GYH0 126 aa6.55□□□□□ -1.36
CDKL5-206ENST00000623610 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 TMEM250H0YL14 139 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 CD3DP04234 171 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 HMGN2P05204 90 aaKnown RBP6.54□□□□□ -1.36
CDKL5-206ENST00000623610 TAS2R45P59539 299 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 DRAM1Q8N682 238 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 MRPL30Q8TCC3 161 aaKnown RBP6.54□□□□□ -1.36
CDKL5-206ENST00000623610 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 SPENQ96T58 3664 aaKnown RBP6.54□□□□□ -1.36
CDKL5-206ENST00000623610 NINQ8N4C6 2090 aa6.54□□□□□ -1.36
CDKL5-206ENST00000623610 TRAV9-1A0A075B6T8 112 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 MCRIP1C9JLW8 97 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 FSTL3O95633 263 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 QRFPP83859 136 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 EBI3Q14213 229 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 C9orf40Q8IXQ3 194 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 CKLFQ9UBR5 152 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 PIEZO2Q9H5I5 2752 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 CACNA1GO43497 2377 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 KALRNO60229 2985 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 PSPHP1O15172 72 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 SNCGO76070 127 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 LINC00869P0C866 280 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
CDKL5-206ENST00000623610 SPATA45Q537H7 98 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 SPRNQ5BIV9 151 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 BVES-AS1Q5T3Y7 98 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 SLC48A1Q6P1K1 146 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 IGSF10Q6WRI0 2623 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 MARCH3Q86UD3 253 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 OR51H1Q8NH63 302 aa6.53□□□□□ -1.36
CDKL5-206ENST00000623610 FAM208BQ5VWN6 2430 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 IGHV1-69DA0A0B4J2H0 117 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 PLA2G10O15496 165 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 C19orf48Q6RUI8 117 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 FLVCR1-AS1Q8TAF5 88 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 SCGB1C1Q8TD33 95 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 AMELYQ99218 206 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 CCL13Q99616 98 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 ATRXP46100 2492 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 IGKV1-27A0A075B6S5 117 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 COX7A2LO14548 114 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 SLC25A4P12235 298 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
CDKL5-206ENST00000623610 SNRPGP62308 76 aaKnown RBP6.52□□□□□ -1.37
CDKL5-206ENST00000623610 ZNF79Q15937 498 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 C12orf73Q69YU5 71 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 MORN4Q8NDC4 146 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 BCL2L10Q9HD36 194 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 FAM60AQ9NP50 221 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 ZNF706Q9Y5V0 76 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-206ENST00000623610 F11RQ9Y624 299 aaKnown RBP6.52□□□□□ -1.37
CDKL5-206ENST00000623610 SPCS1Q9Y6A9 102 aa6.52□□□□□ -1.37
CDKL5-206ENST00000623610 ZNF860A6NHJ4 632 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 H3BRM9 83 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 UBE2L6O14933 153 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 CST7O76096 145 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 SMIM11AP58511 58 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 DEFB110Q30KQ9 67 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 MUCL1Q96DR8 90 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 SHANK2-AS3Q9BTD1 123 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 PLA2G12AQ9BZM1 189 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 MDC1Q14676 2089 aaKnown RBP6.51□□□□□ -1.37
CDKL5-206ENST00000623610 SCN3AQ9NY46 2000 aa6.51□□□□□ -1.37
CDKL5-206ENST00000623610 IGHV4-28A0A0C4DH34 117 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 RBAKDNA6NC62 111 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 CPSF4LA6NMK7 179 aaKnown RBP6.5□□□□□ -1.37
CDKL5-206ENST00000623610 SYNGR2O43760 224 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 VDAC1P21796 283 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 FCGR2CP31995 323 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 ZNF138P52744 262 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 DEFB134Q4QY38 66 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 UBE2NLQ5JXB2 153 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 RUSC1-AS1Q66K80 236 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 EBLN2Q6P2I7 272 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 OR10P1Q8NGE3 313 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 TIMM17AQ99595 171 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 PARLQ9H300 379 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 LSM2Q9Y333 95 aaKnown RBP6.5□□□□□ -1.37
CDKL5-206ENST00000623610 H3BT86 120 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 SFTA3P0C7M3 94 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 PIPP12273 146 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-206ENST00000623610 HLA-DRB4P13762 266 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 SNRPD3P62318 126 aaKnown RBP6.5□□□□□ -1.37
CDKL5-206ENST00000623610 LCA10Q71F78 164 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
CDKL5-206ENST00000623610 HLA-DRB4X5D2U9 266 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms