RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 NDFIP1Q9BT67 221 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
SND1-IT1-201ENST00000623342 FAM181BA6NEQ2 426 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 RAB4AP20338 218 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 RIGQ13278 110 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 C15orf32Q32M92 178 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 ZNF502Q8TBZ5 544 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 C8orf49Q96NF6 230 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 CENPVL3A0A0U1RRI6 287 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 A0A1B0GW15 77 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 FBLL1A6NHQ2 334 aaKnown RBP6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 GPR183P32249 361 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 CTRLP40313 264 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 RHOGP84095 191 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 Q6AWC8 147 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 MRPL52Q86TS9 123 aaKnown RBP6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 SMAD5-AS1Q9Y6J3 95 aa6.48□□□□□ -1.37
SND1-IT1-201ENST00000623342 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 ARMS2P0C7Q2 107 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 RNF224P0DH78 156 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 SPATA45Q537H7 98 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 SAPCD1Q5SSQ6 148 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 GATD1Q8NB37 220 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 IGKV2-40A0A087WW87 121 aaPredicted RBP6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 IGKV2D-40P01614 121 aaPredicted RBP6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 IGHV4-39P01824 125 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 PRB1P04280 392 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 PMCHL1Q16048 86 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 EBLN2Q6P2I7 272 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 COX8CQ7Z4L0 72 aa6.47□□□□□ -1.37
SND1-IT1-201ENST00000623342 APCP25054 2843 aa6.46□□□□□ -1.37
SND1-IT1-201ENST00000623342 IGHV3-35A0A0C4DH35 117 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 TMEM189A5PLL7 270 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 M0QZ24 198 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 M0QZK8 103 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 CLEC3BP05452 202 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 LINC00614P0C842 121 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 RAB9AP51151 201 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 RELQ04864 619 aaPredicted RBP6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 ZFAND3Q9H8U3 227 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 TEX15Q9BXT5 2789 aa6.46□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV3OR16-8A0A075B7F1 116 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 G3V318 75 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 SH2D1AO60880 128 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 GOSR1O95249 250 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 SSTP61278 116 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 NUTF2P61970 127 aaKnown RBP6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 PAX8Q06710 450 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 DMRTA1Q5VZB9 504 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 LCN12Q6JVE5 192 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 C5orf56Q8N8D9 126 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 PRR25Q96S07 402 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 TPPP3Q9BW30 176 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 LINC01548A6NM66 108 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHG4P01861 327 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 CYB5R2Q6BCY4 276 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 KLHDC1Q8N7A1 406 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 CCDC140Q96MF4 163 aa6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 HELZ2Q9BYK8 2649 aaKnown RBP6.45□□□□□ -1.38
SND1-IT1-201ENST00000623342 A0A087X0K7 114 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 BUB3O43684 328 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGFL4Q6B9Z1 124 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 CLEC19AQ6UXS0 136 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 ATOH7Q8N100 152 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 VGLL1Q99990 258 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 PIMREGQ9BSJ6 248 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 TMEM70Q9BUB7 260 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 CLEC5AQ9NY25 188 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 UQCR10Q9UDW1 63 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 TLN2Q9Y4G6 2542 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 TMSB15BA0A087X1C1 80 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 LEPROTL1O95214 131 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 OR5AL1P0C617 328 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGLC3P0DOY3 106 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 HLA-DMBP28068 263 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 BMI1P35226 326 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 LYZL1Q6UWQ5 148 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 ZNF493Q6ZR52 646 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 BBC3Q96PG8 261 aaPredicted RBP6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 CSPG4Q6UVK1 2322 aa6.44□□□□□ -1.38
SND1-IT1-201ENST00000623342 TRAV9-2A0A087WT02 112 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 CLPSL1A2RUU4 121 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 CRXO43186 299 aaPredicted RBP6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 IGHV1-69P01742 117 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 RPS20P60866 119 aaKnown RBP6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 TMEM219Q86XT9 240 aa6.43□□□□□ -1.38
SND1-IT1-201ENST00000623342 Q8TAT8 98 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms