RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GAGE2BQ13066 116 aa9.9□□□□□ -0.83
LITAF-221ENST00000622633 GAGE2EQ4V326 116 aa9.9□□□□□ -0.83
LITAF-221ENST00000622633 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.83
LITAF-221ENST00000622633 LINC00479Q96M42 142 aa9.9□□□□□ -0.83
LITAF-221ENST00000622633 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.83
LITAF-221ENST00000622633 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.83
LITAF-221ENST00000622633 LOC107984640A0A0U1RRK4 108 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 A8MWL6 223 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 CSN1S1P47710 185 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 ERHP84090 104 aaKnown RBP9.89□□□□□ -0.83
LITAF-221ENST00000622633 C10orf55Q5SWW7 151 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 TMEM200BQ69YZ2 307 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 IGFL3Q6UXB1 125 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 FAM167A-AS1Q96KT0 104 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 SLC25A2Q9BXI2 301 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 TCRBV4S1A1TA0A5B7 111 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 RBMXL3Q8N7X1 1067 aaKnown RBP9.89□□□□□ -0.83
LITAF-221ENST00000622633 RPEQ96AT9 228 aa9.89□□□□□ -0.83
LITAF-221ENST00000622633 FLYWCH2Q96CP2 140 aaKnown RBP9.89□□□□□ -0.83
LITAF-221ENST00000622633 DLL1O00548 723 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 UBE2L3P68036 154 aaKnown RBP9.88□□□□□ -0.83
LITAF-221ENST00000622633 TMEM30BQ3MIR4 351 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 RASL10AQ92737 203 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 IGF2BP2-AS1Q96M15 143 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 UBTD1Q9HAC8 227 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 LINC00694P0DN24 101 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 PYYP10082 97 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 RPL7P18124 248 aaKnown RBP9.88□□□□□ -0.83
LITAF-221ENST00000622633 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 ZNF714Q96N38 554 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
LITAF-221ENST00000622633 NMUP48645 174 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 WT1-ASQ06250 92 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 NUP37Q8NFH4 326 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 PPDPFLQ8WWR9 84 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 SOX21Q9Y651 276 aaPredicted RBP9.87□□□□□ -0.83
LITAF-221ENST00000622633 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 C17orf100A8MU93 164 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 CSN3P07498 182 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 TNFRSF1AP19438 455 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 MFAP4P55083 255 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 LYPD2Q6UXB3 125 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 CCL17Q92583 94 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 SIGLEC9Q9Y336 463 aa9.87□□□□□ -0.83
LITAF-221ENST00000622633 LINC01548A6NM66 108 aa9.86□□□□□ -0.83
LITAF-221ENST00000622633 NPIPB6E9PJ23 425 aa9.86□□□□□ -0.83
LITAF-221ENST00000622633 COX7A2P2O60397 106 aa9.86□□□□□ -0.83
LITAF-221ENST00000622633 LINC01587Q99440 93 aa9.86□□□□□ -0.83
LITAF-221ENST00000622633 MRPL32Q9BYC8 188 aaKnown RBP9.86□□□□□ -0.83
LITAF-221ENST00000622633 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
LITAF-221ENST00000622633 TMEM213A2RRL7 107 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 MOSP00540 346 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 PATE2Q6UY27 113 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 FAM19A5Q7Z5A7 132 aaPredicted RBP9.85□□□□□ -0.83
LITAF-221ENST00000622633 RITA1Q96K30 269 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 PLAUP00749 431 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 LTAP01374 205 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 PRR30Q53SZ7 412 aaPredicted RBP9.85□□□□□ -0.83
LITAF-221ENST00000622633 C10orf113Q5VZT2 155 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 ATP5L2Q7Z4Y8 100 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 CEND1Q8N111 149 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 OR4C13Q8NGP0 309 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 TMEM167AQ8TBQ9 72 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 PAXXQ9BUH6 204 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 CHAC1Q9BUX1 264 aa9.85□□□□□ -0.83
LITAF-221ENST00000622633 AMMECR1Q9Y4X0 333 aaPredicted RBP9.85□□□□□ -0.83
LITAF-221ENST00000622633 A0A0G2JNJ9 132 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 CRLF1O75462 422 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 ZNF688P0C7X2 276 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 EVI2AP22794 236 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 BSPH1Q075Z2 132 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 RRN3P1Q2M238 152 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 TPSG1Q9NRR2 321 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 Q9UFV3 132 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 TMEM178BH3BS89 294 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 IGLV2-23P01705 113 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 LGALS9BQ3B8N2 356 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 LGALS9CQ6DKI2 356 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 ZNF329Q86UD4 541 aa9.84□□□□□ -0.83
LITAF-221ENST00000622633 IGHV3-72A0A0B4J1Y9 119 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 NDUFB3O43676 98 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 RUSC1-AS1Q66K80 236 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 Q6Q795 121 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 TMEM262E9PQX1 116 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 INS-IGF2F8WCM5 200 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 ENSAO43768 121 aaKnown RBP9.83□□□□□ -0.84
LITAF-221ENST00000622633 PDPNQ86YL7 162 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 NAV3Q8IVL0 2385 aa9.83□□□□□ -0.84
LITAF-221ENST00000622633 PKDREJQ9NTG1 2253 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms