RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PRRC2CQ9Y520 2896 aaKnown RBP6.32□□□□□ -1.4
VPS11-209ENST00000622309 CEP192Q8TEP8 1941 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 A0A0U1RQV1 116 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 C19orf71A6NCJ1 209 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 MORN5Q5VZ52 161 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 USP24Q9UPU5 2620 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 DPM2O94777 84 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 CD3EP07766 207 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 TWIST1Q15672 202 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 TMEM78Q5T7P6 136 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 MORN3Q6PF18 240 aaPredicted RBP6.32□□□□□ -1.4
VPS11-209ENST00000622309 AAED1Q7RTV5 226 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 ITLN1Q8WWA0 313 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 SRSF12Q8WXF0 261 aaKnown RBP6.32□□□□□ -1.4
VPS11-209ENST00000622309 HHLA3Q9XRX5 114 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 CHD6Q8TD26 2715 aa6.32□□□□□ -1.4
VPS11-209ENST00000622309 FAM208BQ5VWN6 2430 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 HCFC1P51610 2035 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 TRAV8-1A0A0A6YYK1 113 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 NCBP2LA6PVI3 153 aaKnown RBP6.31□□□□□ -1.4
VPS11-209ENST00000622309 SRRM4A7MD48 611 aaKnown RBP6.31□□□□□ -1.4
VPS11-209ENST00000622309 PATE3B3GLJ2 98 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 CRLF1O75462 422 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 FAM27E3Q08E93 113 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 TBC1D28Q2M2D7 210 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 C10orf113Q5VZT2 155 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 ZFP2Q6ZN57 461 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 ORMDL3Q8N138 153 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 FMC1Q96HJ9 113 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 DMXL1Q9Y485 3027 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 ATRXP46100 2492 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 A0A1W2PPI3 338 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 LINC01548A6NM66 108 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 HSPE1P61604 102 aaKnown RBP6.31□□□□□ -1.4
VPS11-209ENST00000622309 FOXF2Q12947 444 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 PIP4P1Q86T03 277 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 C17orf82Q86X59 251 aaPredicted RBP6.31□□□□□ -1.4
VPS11-209ENST00000622309 S1PR3Q99500 378 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 DEFB126Q9BYW3 111 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 CHD8Q9HCK8 2581 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 MYMXA0A1B0GTQ4 84 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 J3QT63 122 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 KIR2DS2P43631 304 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 HES1Q14469 280 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 POU2AF1Q16633 256 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 MAPKAPK5-AS1Q8N8E1 139 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 RFESDQ8TAC1 157 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 MRAPQ8TCY5 172 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 RASL10AQ92737 203 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 FOXC2Q99958 501 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 PEMTQ9UBM1 199 aa6.31□□□□□ -1.4
VPS11-209ENST00000622309 IGKV1OR2-108A0A075B7D4 117 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 IGLV3-32A0A0A0MS00 114 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 TM4SF5O14894 197 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 IGHV3-9P01782 118 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 Q6ZQT7 251 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 OCIAD1Q9NX40 245 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 EXPH5Q8NEV8 1989 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 WI2-2373I1.2A0A1W2PRP0 233 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 SCRG1O75711 98 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 IGHG4P01861 327 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 CELA2AP08217 269 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 HLA-DRB4P13762 266 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 CD69Q07108 199 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 STHQ8IWL8 128 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 OR13C6PQ8NH95 151 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 MDFICQ9P1T7 246 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 PRNDQ9UKY0 176 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 HLA-DRB4X5D2U9 266 aa6.3□□□□□ -1.4
VPS11-209ENST00000622309 RP1L1Q8IWN7 2480 aaPredicted RBP6.3□□□□□ -1.4
VPS11-209ENST00000622309 C15orf61A6NNL5 157 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 PLAUP00749 431 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 Q8IYB0 196 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 C15orf53Q8NAA6 179 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 SVILO95425 2214 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 AGRNO00468 2067 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 FRYQ5TBA9 3013 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 CKS2P33552 79 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 TRBV7-3A0A075B6L6 115 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 J3KT08 172 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 ATP5LO75964 103 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 MLANAQ16655 118 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 PRNTQ86SH4 94 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 FXYD5Q96DB9 178 aa6.29□□□□□ -1.4
VPS11-209ENST00000622309 TRAV40A0A0B4J280 105 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 SPINT2O43291 252 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 LEPP41159 167 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 AMN1Q8IY45 258 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 AAMDCQ9H7C9 122 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 C21orf62Q9NYP8 219 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 GNG12Q9UBI6 72 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 DNAJC13O75165 2243 aa6.28□□□□□ -1.4
VPS11-209ENST00000622309 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms