RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 C15orf32Q32M92 178 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 PRR31Q5SQ13 230 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 PIP4P2Q8N4L2 257 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 KLHDC1Q8N7A1 406 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 ASCL2Q99929 193 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 TRAV9-2A0A087WT02 112 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 C19orf84I3L1E1 186 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 M0QZ24 198 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 NPFFO15130 113 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 RAB9AP51151 201 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 SRSF2Q01130 221 aaKnown RBP7.32□□□□□ -1.24
PDPN-212ENST00000621990 SPATA12Q7Z6I5 190 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 PRR25Q96S07 402 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 NCOR2Q9Y618 2525 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 WNK2Q9Y3S1 2297 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 RHOGP84095 191 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 UNQ5815/PRO19632Q6UWF5 114 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 U3KQK5 164 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
PDPN-212ENST00000621990 BUB3O43684 328 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 SH2D1AO60880 128 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
PDPN-212ENST00000621990 UQCRFS1P47985 274 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 ZNF575Q86XF7 245 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 C5orf56Q8N8D9 126 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 CLEC5AQ9NY25 188 aa7.31□□□□□ -1.24
PDPN-212ENST00000621990 CLPSL1A2RUU4 121 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 TCAPO15273 167 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 GPR183P32249 361 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 RELQ04864 619 aaPredicted RBP7.3□□□□□ -1.24
PDPN-212ENST00000621990 PAX8Q06710 450 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 C19orf54Q5BKX5 351 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 ATP6V0BQ99437 205 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 SYS1-DBNDD2H3BUS1 97 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 LEPROTL1O95214 131 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 RPLP1P05386 114 aaKnown RBP7.3□□□□□ -1.24
PDPN-212ENST00000621990 CLEC3BP05452 202 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 CRIP2P52943 208 aaPredicted RBP7.3□□□□□ -1.24
PDPN-212ENST00000621990 ECSCRQ19T08 205 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 VGLL1Q99990 258 aa7.3□□□□□ -1.24
PDPN-212ENST00000621990 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 RBAKDNA6NC62 111 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 IGHV4-39P01824 125 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
PDPN-212ENST00000621990 ATOH7Q8N100 152 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 LINC01548A6NM66 108 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
PDPN-212ENST00000621990 GNLYP22749 145 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 MRPS16Q9Y3D3 137 aaKnown RBP7.29□□□□□ -1.24
PDPN-212ENST00000621990 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 G3V318 75 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 GOSR1O95249 250 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 BMI1P35226 326 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 ZNF80P51504 273 aaPredicted RBP7.29□□□□□ -1.24
PDPN-212ENST00000621990 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 EEF1AKMT3Q96AZ1 226 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
PDPN-212ENST00000621990 IGLL1P15814 213 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 HLA-DMBP28068 263 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 TSPOP30536 169 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 ZNF138P52744 262 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 PET117Q6UWS5 81 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 Q6ZN92 141 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 PIFOQ8TCI5 191 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 HSPB8Q9UJY1 196 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 U3KQE9 123 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 Q8TAT8 98 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 SLC50A1Q9BRV3 221 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 AP5S1Q9NUS5 200 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 MOB4Q9Y3A3 225 aa7.28□□□□□ -1.24
PDPN-212ENST00000621990 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 HNRNPA3P51991 378 aaKnown RBP7.27□□□□□ -1.25
PDPN-212ENST00000621990 COL5A1-AS1Q5SY13 56 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 MRPL53Q96EL3 112 aaKnown RBP7.27□□□□□ -1.25
PDPN-212ENST00000621990 TPPP3Q9BW30 176 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 LAMTOR2Q9Y2Q5 125 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 IGHV3OR16-8A0A075B7F1 116 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 IGHV1-69DA0A0B4J2H0 117 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 IGHV3-35A0A0C4DH35 117 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 TMEM213A2RRL7 107 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 FAM223BA6NKX1 122 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 BRI3O95415 125 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 IGHV1-69P01742 117 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 IGFL4Q6B9Z1 124 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 CLEC19AQ6UXS0 136 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 FAM223AQ8IWN6 122 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 MAP1LC3CQ9BXW4 147 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 MEGF9Q9H1U4 602 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 MED13LQ71F56 2210 aa7.27□□□□□ -1.25
PDPN-212ENST00000621990 CELSR1Q9NYQ6 3014 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms