RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 CEND1Q8N111 149 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 DDB2Q92466 427 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 RPEQ96AT9 228 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 C8orf49Q96NF6 230 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 MLST8Q9BVC4 326 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 TRBV20-1A0A075B6N2 111 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 IGHV3OR16-8A0A075B7F1 116 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 C19orf71A6NCJ1 209 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 M0R1B8 84 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 PRR7Q8TB68 274 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 DEFB104AQ8WTQ1 72 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 MAP1LC3AQ9H492 121 aa7.8□□□□□ -1.16
TNFAIP3-210ENST00000620204 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 C7orf69Q9H7B7 122 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 SMPXQ9UHP9 88 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 PTPRBP23467 1997 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 TLN1Q9Y490 2541 aaKnown RBP7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 PRSS29PA6NIE9 313 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 CT83Q5H943 113 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 GFRA4Q9GZZ7 299 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 NCBP2LA6PVI3 153 aaKnown RBP7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 KLRC4-KLRK1H3BQV0 150 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 SIVA1O15304 175 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 GATA1P15976 413 aaPredicted RBP7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 PRTN3P24158 256 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 DIAPH2-AS1Q14236 149 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 C3orf36Q3SXR2 165 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 IGFL4Q6B9Z1 124 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 SMIM20Q8N5G0 67 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 RASL11BQ9BPW5 248 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 TPSG1Q9NRR2 321 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 ZNF492Q9P255 531 aa7.79□□□□□ -1.16
TNFAIP3-210ENST00000620204 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 FAM90A27PA6NNH2 459 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 MZT1Q08AG7 82 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 C17orf58Q2M2W7 97 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 ASCL5Q7RTU5 278 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 FAM90A1Q86YD7 464 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 PIP4P2Q8N4L2 257 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 MYOZ3Q8TDC0 251 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 A0A096LNJ9 63 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 PRRG2O14669 202 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 DPM2O94777 84 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 KLF17Q5JT82 389 aaPredicted RBP7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 FAM104BQ5XKR9 115 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 RUSC1-AS1Q66K80 236 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 TEX29Q8N6K0 151 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 Q8TAT8 98 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 ZNF502Q8TBZ5 544 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 MSRB1Q9NZV6 116 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 HOXA3O43365 443 aaPredicted RBP7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 VMA21Q3ZAQ7 101 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 AAMDCQ9H7C9 122 aa7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 MRPL35Q9NZE8 188 aaKnown RBP7.78□□□□□ -1.16
TNFAIP3-210ENST00000620204 CCL8P80075 99 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 C1orf122Q6ZSJ8 110 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZCCHC24Q8N2G6 241 aaKnown RBP7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 NDUFA4L2Q9NRX3 87 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 COL5A1P20908 1838 aaPredicted RBP7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 AKAP13Q12802 2813 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 CGB1A6NKQ9 187 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 SRRM5B3KS81 715 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 FDCSPQ8NFU4 85 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 TMEM133Q9H2Q1 129 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 OTORQ9NRC9 128 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 KLF12Q9Y4X4 402 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 DSCAMO60469 2012 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 DLX1P56177 255 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 VKORC1Q9BQB6 163 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 HIF1ANQ9NWT6 349 aa7.77□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGKV1D-37A0A075B6S9 117 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 OR11H12B2RN74 326 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 FOXI1Q12951 378 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 OR11H1Q8NG94 326 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 OR4C13Q8NGP0 309 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 OR11H2Q8NH07 326 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 SPATA25Q9BR10 227 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 PTPRQQ9UMZ3 2332 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGKV2-40A0A087WW87 121 aaPredicted RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 A0A1W2PPI3 338 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 LINC01549A6NIU2 74 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 E9PLD3 99 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 IGKV2D-40P01614 121 aaPredicted RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 RPL27AP46776 148 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 HERV-K104P63124 156 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 TTC32Q5I0X7 151 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZFAND6Q6FIF0 208 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 CFAP161Q6P656 301 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 MAPKAPK5-AS1Q8N8E1 139 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 ZNF71Q9NQZ8 489 aaPredicted RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 J3KRW8 73 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 WT1P19544 449 aaPredicted RBP7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 TCTEX1D4Q5JR98 221 aa7.76□□□□□ -1.17
TNFAIP3-210ENST00000620204 C3orf56Q8N813 242 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms