RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ZNF843Q8N446 348 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 MEGF9Q9H1U4 602 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 A0A1B0GW15 77 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 FAM231BA6NCW3 169 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 SSBP2P81877 361 aaPredicted RBP5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 LINC00173Q6ZV60 143 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 RAB37Q96AX2 223 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 NDFIP1Q9BT67 221 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 VCX2Q9H322 139 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 FNDC4Q9H6D8 234 aaPredicted RBP5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 LRRK2Q5S007 2527 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 H3BUT2 72 aa5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 CIARTQ8N365 385 aaPredicted RBP5.57□□□□□ -1.52
SRGAP3-213ENST00000618999 TRAV8-1A0A0A6YYK1 113 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 A0A1B0GXF2 115 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 LOXP28300 417 aaPredicted RBP5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 WT1-ASQ06250 92 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 UTF1Q5T230 341 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 Q6AWC8 147 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 C8orf46Q8TAG6 207 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 NEU4Q8WWR8 484 aaPredicted RBP5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 TNFRSF14Q92956 283 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 TRGV9Q99603 122 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 YLPM1P49750 1951 aaKnown RBP5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 DSCAMO60469 2012 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 A0A1W2PPR1 153 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 TEX22C9J3V5 150 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 PPBPP02775 128 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 FABP2P12104 132 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 PATE2Q6UY27 113 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 Q86TA4 180 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 C1RLQ9NZP8 487 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 THYN1Q9P016 225 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 HCFC1P51610 2035 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 TNCP24821 2201 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 J3QR89 54 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 NDUFS7O75251 213 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 COX8AP10176 69 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 FAM71F2Q6NXP2 309 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNF833PQ6ZTB9 187 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 ZNF414Q96IQ9 312 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 INSIG2Q9Y5U4 225 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 DOPEY1Q5JWR5 2465 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 USP9XQ93008 2570 aaPredicted RBP5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 COL12A1Q99715 3063 aa5.56□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM189A5PLL7 270 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CGB3P0DN86 165 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CGB7P0DN87 165 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 VPREB1P12018 145 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 PLP1P60201 277 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 THAP8Q8NA92 274 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 SCRT2Q9NQ03 307 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 TP73-AS1Q9UF72 201 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 HILPDAQ9Y5L2 63 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 LTAP01374 205 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CKS2P33552 79 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 RIPPLY3P57055 190 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 RHOGP84095 191 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 SIGLEC15Q6ZMC9 328 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 OR2K2Q8NGT1 345 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 RPEQ96AT9 228 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CTSZQ9UBR2 303 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 WNK2Q9Y3S1 2297 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 A0A1W2PPI3 338 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM238C9JI98 176 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CRXO43186 299 aaPredicted RBP5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 HSD52Q0P140 79 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 TMEM200BQ69YZ2 307 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 ORMDL3Q8N138 153 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 EXOC3-AS1Q8N2X6 119 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 GTSF1Q8WW33 167 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 SPCS1Q9Y6A9 102 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 PRSS1P07477 247 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 ARMS2P0C7Q2 107 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 CACNG7P62955 275 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 OR9G4Q8NGQ1 327 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 FAM110DQ8TAY7 271 aaPredicted RBP5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 KLF12Q9Y4X4 402 aa5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 F11RQ9Y624 299 aaKnown RBP5.55□□□□□ -1.52
SRGAP3-213ENST00000618999 GCSHP23434 173 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 TEX45Q8NA69 505 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 OR4X2Q8NGF9 303 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 MDFIQ99750 246 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 NAA38Q9BRA0 125 aaKnown RBP5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 PSG8Q9UQ74 426 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 FLNCQ14315 2725 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 LRBAP50851 2863 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 A0A0G2JLM5 398 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 HBDP02042 147 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 PRB3Q04118 309 aaPredicted RBP5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 DTX2Q86UW9 622 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 SLC25A39Q9BZJ4 359 aaPredicted RBP5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 SELENOKQ9Y6D0 94 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 TRAV8-6A0A0B4J262 113 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 COX7A1P24310 79 aa5.54□□□□□ -1.52
SRGAP3-213ENST00000618999 TWIST1Q15672 202 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms