RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TCRAP04437 139 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 RPL22P35268 128 aaKnown RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 ARPC4P59998 168 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 MAXP61244 160 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 MRPS36P82909 103 aaKnown RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 CCDC153Q494R4 210 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 SPRNQ5BIV9 151 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 KRTAP26-1Q6PEX3 210 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 ARPINQ7Z6K5 226 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 GKN2Q86XP6 184 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 ARL17AQ8IVW1 177 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 FAM19A2Q8N3H0 131 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 OR4B1Q8NGF8 309 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 OR51A4Q8NGJ6 313 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 OR4C6Q8NH72 309 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 PSMF1Q92530 271 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 OR4C12Q96R67 309 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 NABP2Q9BQ15 211 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 TMEM138Q9NPI0 162 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 SOX21Q9Y651 276 aaPredicted RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 MGAMO43451 1857 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 BAZ2BQ9UIF8 2168 aaKnown RBP0.81□□□□□ -2.28
TARDBP-220ENST00000618606 TRPM1Q7Z4N2 1603 aa0.81□□□□□ -2.28
TARDBP-220ENST00000618606 TCOF1Q13428 1488 aaKnown RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 DLC1Q96QB1 1528 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 NISCHQ9Y2I1 1504 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 ANAPC1Q9H1A4 1944 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 KMT2BQ9UMN6 2715 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 LYRM1O43325 122 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 DPM2O94777 84 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 SLC25A5P05141 298 aaKnown RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 PAEPP09466 180 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 SCTP09683 121 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 CXCL8P10145 99 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 SLC25A4P12235 298 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 TPT1P13693 172 aaKnown RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 BLCAPP62952 87 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 PSPHP78330 225 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 HIST1H1AQ02539 215 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 DIAPH2-AS1Q14236 149 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 UNQ6190/PRO20217Q6UXQ8 127 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 ZCCHC23Q6ZST2 131 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 TCTE3Q8IZS6 198 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 LINC00269Q8N2A0 174 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 NAT14Q8WUY8 206 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 PATE1Q8WXA2 126 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 LZICQ8WZA0 190 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 MCEEQ96PE7 176 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 FAM107BQ9H098 131 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 HSPB8Q9UJY1 196 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 DSPPQ9NZW4 1301 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 LAMB4A4D0S4 1761 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 LAMB2P55268 1798 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 DOCK10Q96BY6 2186 aa0.8□□□□□ -2.28
TARDBP-220ENST00000618606 NUP210Q8TEM1 1887 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-220ENST00000618606 EML6Q6ZMW3 1958 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-220ENST00000618606 IGKV3D-7A0A0C4DH55 119 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 IGKV3OR2-268A0A0C4DH90 116 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 C3orf85A0A1B0GTC6 90 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 F8W1H4 67 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 CCL25O15444 150 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 KLF7O75840 302 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-220ENST00000618606 OR2H2O95918 312 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 DNAL4O96015 105 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 HBDP02042 147 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 ZNF25P17030 456 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-220ENST00000618606 SMCO1Q147U7 214 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 HSD17B12Q53GQ0 312 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 FAM74A1Q5RGS3 127 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 C2orf82Q6UX34 121 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 FOXI2Q6ZQN5 318 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 OR5A2Q8NGI9 324 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 BORCS5Q969J3 196 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 OBSCN-AS1Q96MR7 158 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 LINC00052Q96N35 136 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 AP1S3Q96PC3 154 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 CST11Q9H112 138 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 SPANXA1Q9NS26 97 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 MED9Q9NWA0 146 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 CALML5Q9NZT1 146 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 ORMDL1Q9P0S3 153 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 ZFP30Q9Y2G7 519 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 SNURFQ9Y675 71 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 RFX7Q2KHR2 1363 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 MED23Q9ULK4 1368 aa0.79□□□□□ -2.28
TARDBP-220ENST00000618606 PIK3C2AO00443 1686 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 COL4A1P02462 1669 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 TRBV6-7A0A0A0MS04 114 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 BORCS7-ASMTA0A0B4J1R7 106 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 TRBV6-4A0A1B0GX49 114 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 ZNF727A8MUV8 499 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 TRACP01848 142 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 PRB1P04280 392 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 DBIP07108 87 aaKnown RBP0.78□□□□□ -2.28
TARDBP-220ENST00000618606 CD14P08571 375 aa0.78□□□□□ -2.28
TARDBP-220ENST00000618606 SRP9P49458 86 aaKnown RBP0.78□□□□□ -2.28
TARDBP-220ENST00000618606 SNRPD3P62318 126 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms