RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 NHLH1Q02575 133 aa15.96■□□□□ 0.15
NEK3-208ENST00000618534 KLRD1Q13241 179 aa15.96■□□□□ 0.15
NEK3-208ENST00000618534 IGLV11-55A0A075B6I3 123 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 MFAP4P55083 255 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 RPS20P60866 119 aaKnown RBP15.95■□□□□ 0.14
NEK3-208ENST00000618534 NPBQ8NG41 125 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 SMKR1H3BMG3 65 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 TCTAP57738 103 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 CACNG7P62955 275 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 HES1Q14469 280 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 ZNF672Q499Z4 452 aaPredicted RBP15.95■□□□□ 0.14
NEK3-208ENST00000618534 TMEM97Q5BJF2 176 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 LINC01560Q8TB33 94 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 CST9LQ9H4G1 147 aa15.95■□□□□ 0.14
NEK3-208ENST00000618534 C7orf71A4D174 169 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 IGHV3-23P01764 117 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 LY6G5BQ8NDX9 201 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 Q8TAT8 98 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 LY6HO94772 140 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 EGR2P11161 476 aaPredicted RBP15.94■□□□□ 0.14
NEK3-208ENST00000618534 C5orf64Q2M2E5 130 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 LGALS9BQ3B8N2 356 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 LGALS9CQ6DKI2 356 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 S100A7AQ86SG5 101 aa15.94■□□□□ 0.14
NEK3-208ENST00000618534 RIF1Q5UIP0 2472 aaKnown RBP15.93■□□□□ 0.14
NEK3-208ENST00000618534 DPF1Q92782 380 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 PRR25Q96S07 402 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 PEF1Q9UBV8 284 aaKnown RBP15.93■□□□□ 0.14
NEK3-208ENST00000618534 DCHS2Q6V1P9 2916 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 NPYP01303 97 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 HBDP02042 147 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 UQCRFS1P47985 274 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 NDPQ00604 133 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 PAX8Q06710 450 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 OR11H6Q8NGC7 330 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 RABAC1Q9UI14 185 aa15.93■□□□□ 0.14
NEK3-208ENST00000618534 ZNF80P51504 273 aaPredicted RBP15.92■□□□□ 0.14
NEK3-208ENST00000618534 IGFL4Q6B9Z1 124 aa15.92■□□□□ 0.14
NEK3-208ENST00000618534 NPIPB5A8MRT5 1133 aa15.92■□□□□ 0.14
NEK3-208ENST00000618534 SEC11AP67812 179 aa15.92■□□□□ 0.14
NEK3-208ENST00000618534 ZNF48Q96MX3 618 aaPredicted RBP15.92■□□□□ 0.14
NEK3-208ENST00000618534 C21orf62Q9NYP8 219 aa15.92■□□□□ 0.14
NEK3-208ENST00000618534 LRBAP50851 2863 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 CSMD1Q96PZ7 3565 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 CKS2P33552 79 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 TWIST1Q15672 202 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 OCIAD2Q56VL3 154 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 SAPCD1Q5SSQ6 148 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 COX8CQ7Z4L0 72 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 FER1L6-AS1Q8NA97 138 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 ARPC1AQ92747 370 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 VGLL1Q99990 258 aa15.91■□□□□ 0.14
NEK3-208ENST00000618534 RPL7P18124 248 aaKnown RBP15.9■□□□□ 0.14
NEK3-208ENST00000618534 HLA-DMBP28068 263 aa15.9■□□□□ 0.14
NEK3-208ENST00000618534 CEACAM3P40198 252 aa15.9■□□□□ 0.14
NEK3-208ENST00000618534 BOD1L2Q8IYS8 172 aa15.9■□□□□ 0.14
NEK3-208ENST00000618534 OR1N2Q8NGR9 330 aa15.9■□□□□ 0.14
NEK3-208ENST00000618534 GRNP28799 593 aaKnown RBP15.89■□□□□ 0.13
NEK3-208ENST00000618534 IFI27L1Q96BM0 104 aa15.89■□□□□ 0.13
NEK3-208ENST00000618534 THYN1Q9P016 225 aa15.89■□□□□ 0.13
NEK3-208ENST00000618534 SMAD5-AS1Q9Y6J3 95 aa15.89■□□□□ 0.13
NEK3-208ENST00000618534 PPBPP02775 128 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 WFDC3Q8IUB2 231 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 GAGE12BA1L429 117 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 ODF3BA8MYP8 253 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 SMAD7O15105 426 aaKnown RBP15.88■□□□□ 0.13
NEK3-208ENST00000618534 IGHG4P01861 327 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 IGLC6P0CF74 106 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 ZNF562Q6V9R5 426 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 ZNF575Q86XF7 245 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 TTC9CQ8N5M4 171 aa15.88■□□□□ 0.13
NEK3-208ENST00000618534 ZFHX2Q9C0A1 2572 aaPredicted RBP15.88■□□□□ 0.13
NEK3-208ENST00000618534 IGHV3OR16-8A0A075B7F1 116 aa15.87■□□□□ 0.13
NEK3-208ENST00000618534 FAM90A27PA6NNH2 459 aa15.87■□□□□ 0.13
NEK3-208ENST00000618534 NCBP2LA6PVI3 153 aaKnown RBP15.87■□□□□ 0.13
NEK3-208ENST00000618534 MSRB1Q9NZV6 116 aa15.87■□□□□ 0.13
NEK3-208ENST00000618534 ABCA4P78363 2273 aa15.87■□□□□ 0.13
NEK3-208ENST00000618534 NDUFS7O75251 213 aa15.86■□□□□ 0.13
NEK3-208ENST00000618534 DYNAPQ8N1N2 210 aa15.86■□□□□ 0.13
NEK3-208ENST00000618534 VKORC1Q9BQB6 163 aa15.86■□□□□ 0.13
NEK3-208ENST00000618534 ANKHD1Q8IWZ3 2542 aaKnown RBP15.86■□□□□ 0.13
NEK3-208ENST00000618534 BMI1P35226 326 aa15.86■□□□□ 0.13
NEK3-208ENST00000618534 SPTBN2O15020 2390 aa15.86■□□□□ 0.13
NEK3-208ENST00000618534 IGHV3-35A0A0C4DH35 117 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 A1L4Q6 167 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 CTSGP08311 255 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 JMJD8Q96S16 334 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 DKK2Q9UBU2 259 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 GAS8-AS1O95177 125 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 PRSS57Q6UWY2 283 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 PCP2Q8IVA1 136 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 ARL6IP6Q8N6S5 226 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 RNF185Q96GF1 192 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 VPS25Q9BRG1 176 aa15.85■□□□□ 0.13
NEK3-208ENST00000618534 ORM1P02763 201 aa15.84■□□□□ 0.13
NEK3-208ENST00000618534 NMUP48645 174 aa15.84■□□□□ 0.13
NEK3-208ENST00000618534 C18orf15Q96N68 181 aa15.84■□□□□ 0.13
NEK3-208ENST00000618534 A6NDN8 102 aa15.84■□□□□ 0.13
NEK3-208ENST00000618534 GAGE10A6NGK3 116 aa15.84■□□□□ 0.13
NEK3-208ENST00000618534 PRTN3P24158 256 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms