RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 NDUFS6O75380 124 aaKnown RBP11.09□□□□□ -0.63
CIITA-213ENST00000618327 OR10J3Q5JRS4 329 aa11.09□□□□□ -0.63
CIITA-213ENST00000618327 IGHV4-30-2A0A087WSY4 118 aa11.09□□□□□ -0.63
CIITA-213ENST00000618327 CACNG7P62955 275 aa11.09□□□□□ -0.63
CIITA-213ENST00000618327 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
CIITA-213ENST00000618327 ASCL2Q99929 193 aa11.09□□□□□ -0.63
CIITA-213ENST00000618327 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
CIITA-213ENST00000618327 SRD5A1P18405 259 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 LEPP41159 167 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 TMEM190Q8WZ59 177 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 TCRAP04437 139 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 NDPQ00604 133 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 TNFRSF18Q9Y5U5 241 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 DYSFO75923 2080 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 CHD8Q9HCK8 2581 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 FAM120AOSQ5T036 256 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
CIITA-213ENST00000618327 LINC01551Q86U37 167 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 C10orf105Q8TEF2 133 aa11.08□□□□□ -0.64
CIITA-213ENST00000618327 NCKAP5O14513 1909 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 FAM181BA6NEQ2 426 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 DPM2O94777 84 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 HSD52Q0P140 79 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 NRGNQ92686 78 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 NPIPB5A8MRT5 1133 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
CIITA-213ENST00000618327 CKS1BP61024 79 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
CIITA-213ENST00000618327 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 IFI27L1Q96BM0 104 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 NXT2Q9NPJ8 142 aaKnown RBP11.06□□□□□ -0.64
CIITA-213ENST00000618327 PPBPP02775 128 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 SELENOKQ9Y6D0 94 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 MKI67P46013 3256 aaKnown RBP11.06□□□□□ -0.64
CIITA-213ENST00000618327 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 IGLV2-14P01704 120 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 GZMBP10144 247 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 PAX1P15863 534 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 FOXL1Q12952 345 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
CIITA-213ENST00000618327 TRBV7-9A0A0J9YWB2 115 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 A8MWV9 139 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 OVOL1O14753 267 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
CIITA-213ENST00000618327 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 Q6ZPA2 131 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 SPAG8Q99932 426 aaPredicted RBP11.06□□□□□ -0.64
CIITA-213ENST00000618327 MS4A6AQ9H2W1 248 aa11.06□□□□□ -0.64
CIITA-213ENST00000618327 CHD9Q3L8U1 2897 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 H3BRM9 83 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 SAMD5Q5TGI4 173 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
CIITA-213ENST00000618327 IGLC7A0M8Q6 106 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
CIITA-213ENST00000618327 TMEM256Q8N2U0 113 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 CCDC168Q8NDH2 2452 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 C9JQL5 133 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
CIITA-213ENST00000618327 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 C9orf139Q6ZV77 190 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 TSKUQ8WUA8 353 aa11.05□□□□□ -0.64
CIITA-213ENST00000618327 OVOL3O00110 214 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 IGFBPL1Q8WX77 278 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 NAA38Q9BRA0 125 aaKnown RBP11.04□□□□□ -0.64
CIITA-213ENST00000618327 TOMM7Q9P0U1 55 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 IGLV1-47P01700 117 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 ADCYAP1P18509 176 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 GAGE2BQ13066 116 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 LURAP1LQ8IV03 231 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 CD33P20138 364 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
CIITA-213ENST00000618327 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
CIITA-213ENST00000618327 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CIITA-213ENST00000618327 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 PAX2Q02962 417 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 ODF3L1Q8IXM7 274 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 LY96Q9Y6Y9 160 aa11.03□□□□□ -0.64
CIITA-213ENST00000618327 IGFL4Q6B9Z1 124 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 LCNL1Q6ZST4 164 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 ZNF664Q8N3J9 261 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 ARHGAP21Q5T5U3 1957 aa11.02□□□□□ -0.64
CIITA-213ENST00000618327 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms