RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 A0A1W2PPM0 123 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 OR2J3O76001 311 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 RPL27AP46776 148 aaKnown RBP9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZNF138P52744 262 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 TCTAP57738 103 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 CD300EQ496F6 205 aaPredicted RBP9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 DTX2Q86UW9 622 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 PPP1R27Q86WC6 154 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 RABAC1Q9UI14 185 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 GGTLC3B5MD39 225 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 SRSF1Q07955 248 aaKnown RBP eCLIP9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 DYNAPQ8N1N2 210 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 SLC25A33Q9BSK2 321 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 HELZ2Q9BYK8 2649 aaKnown RBP9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 TEX22C9J3V5 150 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 FNDC10F2Z333 226 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 IGF2BP2-AS1Q96M15 143 aa9.03□□□□□ -0.96
PCDHGA9-202ENST00000616887 HIGD1CA8MV81 97 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 PYYP10082 97 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 PLGLAQ15195 96 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 TM4SF20Q53R12 229 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 PATE2Q6UY27 113 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 TMEM116Q8NCL8 245 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 NEU4Q8WWR8 484 aaPredicted RBP9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 TENM4Q6N022 2769 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 INS-IGF2F8WCM5 200 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 K7EQM0 130 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 TEX45Q8NA69 505 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 SRSF12Q8WXF0 261 aaKnown RBP9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
PCDHGA9-202ENST00000616887 FABP2P12104 132 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 FAM162BQ5T6X4 162 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 VMO1Q7Z5L0 202 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 BLNKQ8WV28 456 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 CACNG8Q8WXS5 425 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 MBD6Q96DN6 1003 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 SLC25A2Q9BXI2 301 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 S4R3C0 116 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 RBP4P02753 201 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 HES1Q14469 280 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 CFHR4Q92496 578 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 GRAMD2BQ96HH9 432 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 FAM167A-AS1Q96KT0 104 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 TMEM167BQ9NRX6 74 aa9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 FASNP49327 2511 aaKnown RBP9.01□□□□□ -0.97
PCDHGA9-202ENST00000616887 KLF17Q5JT82 389 aaPredicted RBP9□□□□□ -0.97
PCDHGA9-202ENST00000616887 ADAMTSL5Q6ZMM2 481 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 DPM3Q9P2X0 92 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 AMMECR1Q9Y4X0 333 aaPredicted RBP9□□□□□ -0.97
PCDHGA9-202ENST00000616887 GCN1Q92616 2671 aaKnown RBP9□□□□□ -0.97
PCDHGA9-202ENST00000616887 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
PCDHGA9-202ENST00000616887 FGF6P10767 208 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 ORM2P19652 201 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
PCDHGA9-202ENST00000616887 DOPEY1Q5JWR5 2465 aa9□□□□□ -0.97
PCDHGA9-202ENST00000616887 TMEM189A5PLL7 270 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 ODF3BA8MYP8 253 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 H3BTX0 84 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 SUB1P53999 127 aaKnown RBP eCLIP8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 LRRK2Q5S007 2527 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 COX7A2P2O60397 106 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 NCR2O95944 276 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 CSN3P07498 182 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 C8orf88P0DMB2 117 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 PRTN3P24158 256 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 ATP5IP56385 69 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 UBE2L3P68036 154 aaKnown RBP8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
PCDHGA9-202ENST00000616887 CENPEQ02224 2701 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 CNIH1O95406 144 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 OR5AL1P0C617 328 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 HOXB4P17483 251 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 NDPQ00604 133 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 FA2HQ7L5A8 372 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 THAP8Q8NA92 274 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 F11RQ9Y624 299 aaKnown RBP8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 ABCA2Q9BZC7 2435 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 CRYGCP07315 174 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 FCGR2BP31994 310 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 C10orf113Q5VZT2 155 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 LINC00305Q7Z4B0 112 aa8.98□□□□□ -0.97
PCDHGA9-202ENST00000616887 A1L4Q6 167 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 M0R1W7 72 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 NBR2O15453 112 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 HBBP68871 147 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 WFDC2Q14508 124 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 TCTEX1D4Q5JR98 221 aa8.97□□□□□ -0.97
PCDHGA9-202ENST00000616887 MRAP2Q96G30 205 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms