RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 J3KRW8 73 aa14.44□□□□□ -0.1
TRAPPC3-208ENST00000616074 ZNF701M0R085 212 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC3-208ENST00000616074 CCDC28AQ8IWP9 274 aa14.44□□□□□ -0.1
TRAPPC3-208ENST00000616074 GNPNAT1Q96EK6 184 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC3-208ENST00000616074 Q9H8V8 135 aa14.44□□□□□ -0.1
TRAPPC3-208ENST00000616074 A0A0J9YY99 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 GAGE12BA1L429 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 L7N2F9 121 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 GAGE7O76087 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 GAGE12FP0CL80 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 GAGE12GP0CL81 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 GAGE12IP0CL82 117 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 IL7P13232 177 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 M6PRP20645 277 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 HOXA5P20719 270 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 CAMLGP49069 296 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 VAMP2P63027 116 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 C20orf85Q9H1P6 137 aa14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 LSM5Q9Y4Y9 91 aaKnown RBP14.43□□□□□ -0.1
TRAPPC3-208ENST00000616074 TRAV5A0A0B4J249 113 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 CDK2AP2O75956 126 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 RLN2P04090 185 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 CT45A10P0DMU9 189 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 MIC13Q5XKP0 118 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 NRARPQ7Z6K4 114 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 RXFP4Q8TDU9 374 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 KRTAP1-5Q9BYS1 174 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 DNAJC4Q9NNZ3 241 aa14.42□□□□□ -0.1
TRAPPC3-208ENST00000616074 TRAV12-3A0A0B4J271 114 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 SNURFLB1AK76 121 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 BCAP31P51572 246 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 CNPY1Q3B7I2 92 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 Q6ZRG5 221 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 ZNF503Q96F45 646 aa14.41□□□□□ -0.1
TRAPPC3-208ENST00000616074 FAM25EA8MYX2 175 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 NPIPB6E9PJ23 425 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 CST7O76096 145 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 LEPP41159 167 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 CAV2P51636 162 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 ZNF846Q147U1 533 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 ZNF431Q8TF32 576 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 ODF3Q96PU9 254 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 C11orf1Q9H5F2 150 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 ZNF586Q9NXT0 402 aa14.4□□□□□ -0.1
TRAPPC3-208ENST00000616074 FAM24AA6NFZ4 105 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 RAB31Q13636 194 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 GUK1Q16774 197 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 ESRGQ1W209 222 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 OR1L4Q8NGR5 311 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 WDR83OSQ9Y284 106 aa14.39□□□□□ -0.11
TRAPPC3-208ENST00000616074 PLA2G10O15496 165 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 TTC32Q5I0X7 151 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 MAPKAPK5-AS1Q8N8E1 139 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 PFDN5Q99471 154 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 PYGO2Q9BRQ0 406 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 UPK3BQ9BT76 320 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 Q9H3A6 140 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 TMPRSS5Q9H3S3 457 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 UQCC1Q9NVA1 299 aa14.38□□□□□ -0.11
TRAPPC3-208ENST00000616074 VWC2Q2TAL6 325 aa14.37□□□□□ -0.11
TRAPPC3-208ENST00000616074 Q6ZTI0 123 aa14.37□□□□□ -0.11
TRAPPC3-208ENST00000616074 SPATA12Q7Z6I5 190 aa14.37□□□□□ -0.11
TRAPPC3-208ENST00000616074 SEC22CQ9BRL7 303 aa14.37□□□□□ -0.11
TRAPPC3-208ENST00000616074 TRAV6A0A075B6T7 132 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 UBE2L5PA0A1B0GUS4 154 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 C5orf51A6NDU8 294 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 H3BNG1 76 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 M0R3E3 92 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 LYRM1O43325 122 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 ZNF253O75346 499 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 DAZ2Q13117 558 aaKnown RBP14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 SLC39A9Q9NUM3 307 aa14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 MRPS16Q9Y3D3 137 aaKnown RBP14.36□□□□□ -0.11
TRAPPC3-208ENST00000616074 TRBV19A0A075B6N1 114 aa14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 TCRBP04435 133 aa14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 RPL29P47914 159 aaKnown RBP14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 BAXQ07812 192 aa14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 ERCC8Q13216 396 aa14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 MRPL53Q96EL3 112 aaKnown RBP14.35□□□□□ -0.11
TRAPPC3-208ENST00000616074 IGSF23A1L1A6 192 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 C7orf71A4D174 169 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 SLC25A5P05141 298 aaKnown RBP14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 SULT1A1P50225 295 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 C11orf72Q8NBR9 251 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 C2orf50Q96LR7 162 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 GSN-AS1Q9NRJ2 163 aa14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 LYRM2Q9NU23 88 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC3-208ENST00000616074 A0A1W2PPQ1 181 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 NDUFB4O95168 129 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 PVALBP20472 110 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 S100A10P60903 97 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 BTN1A1Q13410 526 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 C12orf45Q8N5I9 185 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 NUDT15Q9NV35 164 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 TMEM14CQ9P0S9 112 aa14.33□□□□□ -0.12
TRAPPC3-208ENST00000616074 TRGV2A0A075B6R0 118 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 A0A096LPF7 62 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 KLLNB2CW77 178 aa14.32□□□□□ -0.12
TRAPPC3-208ENST00000616074 PYYP10082 97 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms