RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TDGF1P13385 188 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 WT1P19544 449 aaPredicted RBP9.94□□□□□ -0.82
CDH1-212ENST00000611625 ZNF479Q96JC4 524 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 IGHV1-24A0A0C4DH33 117 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 NDPQ00604 133 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 CIRBPQ14011 172 aaKnown RBP9.94□□□□□ -0.82
CDH1-212ENST00000611625 TMEM158Q8WZ71 300 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 NPFFO15130 113 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 FAM104BQ5XKR9 115 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 UNQ6494/PRO21346Q6UXR6 183 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 C8orf49Q96NF6 230 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 KMT2EQ8IZD2 1858 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 HAX1O00165 279 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 NDUFB8O95169 186 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 TECTAO75443 2155 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 KAAG1Q9UBP8 84 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 DKK4Q9UBT3 224 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 WDR87Q6ZQQ6 2873 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 IGLC7A0M8Q6 106 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 SFTA2Q6UW10 78 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 STPG4Q8N801 248 aa9.93□□□□□ -0.82
CDH1-212ENST00000611625 TRBV7-1A0A0A6YYK4 115 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 H3BRN7 92 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 ERCC8Q13216 396 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 ZNF295-AS1Q8N0V1 137 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 EML6Q6ZMW3 1958 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 A0A1W2PNU3 283 aaPredicted RBP9.92□□□□□ -0.82
CDH1-212ENST00000611625 SMAD7O15105 426 aaKnown RBP9.92□□□□□ -0.82
CDH1-212ENST00000611625 IGFL2Q6UWQ7 119 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 TNCP24821 2201 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
CDH1-212ENST00000611625 WIPF2Q8TF74 440 aaPredicted RBP9.92□□□□□ -0.82
CDH1-212ENST00000611625 PRSS46E5RG02 174 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 CRXO43186 299 aaPredicted RBP9.91□□□□□ -0.82
CDH1-212ENST00000611625 SRD5A1P18405 259 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 Q5PR19 223 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 UBE2L6O14933 153 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 P0C879 139 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 PIP4P1Q86T03 277 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 CD300EQ496F6 205 aaPredicted RBP9.91□□□□□ -0.82
CDH1-212ENST00000611625 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
CDH1-212ENST00000611625 SAA4P35542 130 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 C8orf31Q8N9H6 132 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 PSMB11A5LHX3 300 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 TGFAP01135 160 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 LTAP01374 205 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 LY6DQ14210 128 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 MORN5Q5VZ52 161 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 LINC00477Q96M19 166 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 DPH3P1Q9H4G8 78 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 ARFGEF3Q5TH69 2177 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 C10orf142B7Z368 130 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 HOXA3O43365 443 aaPredicted RBP9.9□□□□□ -0.82
CDH1-212ENST00000611625 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 PRR25Q96S07 402 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 VCX2Q9H322 139 aa9.9□□□□□ -0.82
CDH1-212ENST00000611625 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.83
CDH1-212ENST00000611625 WFDC12Q8WWY7 111 aa9.9□□□□□ -0.83
CDH1-212ENST00000611625 ANKHD1Q8IWZ3 2542 aaKnown RBP9.9□□□□□ -0.83
CDH1-212ENST00000611625 NUP210LQ5VU65 1888 aa9.9□□□□□ -0.83
CDH1-212ENST00000611625 PLNP26678 52 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 FAM110DQ8TAY7 271 aaPredicted RBP9.89□□□□□ -0.83
CDH1-212ENST00000611625 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 DUSP14O95147 198 aaKnown RBP9.89□□□□□ -0.83
CDH1-212ENST00000611625 GAGE1Q13065 139 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 MRPL51Q4U2R6 128 aaKnown RBP9.89□□□□□ -0.83
CDH1-212ENST00000611625 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
CDH1-212ENST00000611625 GAGE12BA1L429 117 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 MRAP2Q96G30 205 aa9.89□□□□□ -0.83
CDH1-212ENST00000611625 ATP6V0E1O15342 81 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 PLA2G5P39877 138 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
CDH1-212ENST00000611625 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 H3BUX3 64 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 K7EM74 188 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 TDRG1Q3Y452 100 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 PATE2Q6UY27 113 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 BPESC1Q9GZL8 116 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 IGKV1OR2-108A0A075B7D4 117 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 ITLN2Q8WWU7 325 aaPredicted RBP9.88□□□□□ -0.83
CDH1-212ENST00000611625 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
CDH1-212ENST00000611625 A0A1B0GV72 72 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 BRWD1-AS2P59051 145 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 SIGLEC8Q9NYZ4 499 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 IGF2BP2-AS1Q96M15 143 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 MSMPQ1L6U9 139 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 PRSS57Q6UWY2 283 aa9.87□□□□□ -0.83
CDH1-212ENST00000611625 TEX29Q8N6K0 151 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms