RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 K7ERU9 68 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 PAX8Q06710 450 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 KIR3DS1Q14943 382 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 TNFRSF14Q92956 283 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 E7EQL1 145 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 NPYP01303 97 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 DPF1Q92782 380 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
PCDHGB1-202ENST00000611598 H3BRM9 83 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 TIMM23O14925 209 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 HBDP02042 147 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 NMUP48645 174 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 OR1N2Q8NGR9 330 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 Q8TAT8 98 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 DKK2Q9UBU2 259 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 PIEZO2Q9H5I5 2752 aa11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 ANKRD11Q6UB99 2663 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB1-202ENST00000611598 A1L4Q6 167 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 A6NDN8 102 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 SHISA9B4DS77 424 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 LRBAP50851 2863 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 WI2-2373I1.2A0A1W2PRP0 233 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 EGR2P11161 476 aaPredicted RBP11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 IGFL4Q6B9Z1 124 aa11.84□□□□□ -0.51
PCDHGB1-202ENST00000611598 A0A0G2JLM5 398 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 ZNF80P51504 273 aaPredicted RBP11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 HSD52Q0P140 79 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 GFRALQ6UXV0 394 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 C18orf15Q96N68 181 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 AAMDCQ9H7C9 122 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 NDUFS7O75251 213 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 CKS2P33552 79 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 MSRB1Q9NZV6 116 aa11.83□□□□□ -0.52
PCDHGB1-202ENST00000611598 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 LY6LH3BQJ8 138 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 K7EP34 96 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 GNG7O60262 68 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 TWIST1Q15672 202 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 GTF2H5Q6ZYL4 71 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 ABHD17AQ96GS6 310 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 ARHGAP32A7KAX9 2087 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 NPIPB5A8MRT5 1133 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 OR9G4Q8NGQ1 327 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
PCDHGB1-202ENST00000611598 ACACAQ13085 2346 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 HLA-DMBP28068 263 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 PRR25Q96S07 402 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 F8W735 103 aaPredicted RBP11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 PRRG2O14669 202 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 PDE6HQ13956 83 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 OR2K2Q8NGT1 345 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 VGLL1Q99990 258 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 SVEP1Q4LDE5 3571 aa11.81□□□□□ -0.52
PCDHGB1-202ENST00000611598 ONECUT1Q9UBC0 465 aa11.8□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGHV3OR16-8A0A075B7F1 116 aa11.8□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGKV2D-26A0A0A0MRZ7 120 aa11.8□□□□□ -0.52
PCDHGB1-202ENST00000611598 FANCD2OSQ96PS1 177 aa11.8□□□□□ -0.52
PCDHGB1-202ENST00000611598 VSTM5A8MXK1 200 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 NBR2O15453 112 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 OR4X2Q8NGF9 303 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 SRSF8Q9BRL6 282 aaKnown RBP11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 RNF185Q96GF1 192 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 JKAMPQ9P055 326 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 RELNP78509 3460 aa11.79□□□□□ -0.52
PCDHGB1-202ENST00000611598 A0A1W2PPM0 123 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 SIVA1O15304 175 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 TMEM190Q8WZ59 177 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 RNF5Q99942 180 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGHG4P01861 327 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGLC6P0CF74 106 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 EVI2AP22794 236 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 NBL1P41271 181 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 SPCS1Q9Y6A9 102 aa11.78□□□□□ -0.52
PCDHGB1-202ENST00000611598 G3V4G9 280 aa11.77□□□□□ -0.52
PCDHGB1-202ENST00000611598 NDPQ00604 133 aa11.77□□□□□ -0.52
PCDHGB1-202ENST00000611598 KLRD1Q13241 179 aa11.77□□□□□ -0.52
PCDHGB1-202ENST00000611598 RAB1BQ9H0U4 201 aa11.77□□□□□ -0.52
PCDHGB1-202ENST00000611598 IGLV11-55A0A075B6I3 123 aa11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 IGHV3-35A0A0C4DH35 117 aa11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 CFHR4Q92496 578 aa11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 SMAD5-AS1Q9Y6J3 95 aa11.77□□□□□ -0.53
PCDHGB1-202ENST00000611598 PPIFP30405 207 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms