RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 TNRC6AQ8NDV7 1962 aaKnown RBP-0.08□□□□□ -2.42
ITGB5-213ENST00000608945 ABCA2Q9BZC7 2435 aa-0.08□□□□□ -2.42
ITGB5-213ENST00000608945 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
ITGB5-213ENST00000608945 DOCK3Q8IZD9 2030 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 TRAV5A0A0B4J249 113 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 G3V2T6 193 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 HIST1H2BKO60814 126 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 ATP5HO75947 161 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 SERPINA1P01009 418 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 HIST1H2BJP06899 126 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 PDE6GP18545 87 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 ARPP19P56211 112 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 DIAPH2-AS1Q14236 149 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 FOXI2Q6ZQN5 318 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 PHB2Q99623 299 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 USH2AO75445 5202 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 EPPK1P58107 5090 aaKnown RBP-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 CHD9Q3L8U1 2897 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 HEATR5AQ86XA9 2040 aa-0.09□□□□□ -2.42
ITGB5-213ENST00000608945 PLB1Q6P1J6 1458 aa-0.1□□□□□ -2.42
ITGB5-213ENST00000608945 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.42
ITGB5-213ENST00000608945 ZFYVE9O95405 1425 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 DENND4CQ5VZ89 1909 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 A6NN06 94 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 RIIAD1A6NNX1 92 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 TRGC2P03986 189 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 CXCL1P09341 107 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 IDO1P14902 403 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 OGNP20774 298 aaKnown RBP-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 RPS3P23396 243 aaKnown RBP eCLIP-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 Q5BKY6 102 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 XAF1Q6GPH4 301 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 CROCCP2Q86T23 111 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 FAM216BQ8N7L0 139 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 PRAP1Q96NZ9 151 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 LIMD2Q9BT23 127 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 EFCAB11Q9BUY7 163 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 NAT8BQ9UHF3 227 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 PIEZO1Q92508 2521 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 TGP01266 2768 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 FAT3Q8TDW7 4589 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 CEP164Q9UPV0 1460 aa-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 USP9YO00507 2555 aaPredicted RBP-0.1□□□□□ -2.43
ITGB5-213ENST00000608945 MED12Q93074 2177 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 FLNCQ14315 2725 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 TNCP24821 2201 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 USP9XQ93008 2570 aaPredicted RBP-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 ZFC3H1O60293 1989 aaKnown RBP-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 KIAA1549Q9HCM3 1950 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 H7C1C5 153 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 LY6G6CO95867 125 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 IGHV3-30P01768 117 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 CST2P09228 141 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 IGHV3-30-5P0DP03 117 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 RPL37P61927 97 aaKnown RBP-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 SNRPD3P62318 126 aaKnown RBP-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 LCN6P62502 163 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 NEDD8Q15843 81 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 AKR1C8PQ5T2L2 129 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 ANGPTL5Q86XS5 388 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 NEK7Q8TDX7 302 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 PLEKHB2Q96CS7 222 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 PYCARDQ9ULZ3 195 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 SSR3Q9UNL2 185 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 TPRKBQ9Y3C4 175 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 ABCA12Q86UK0 2595 aa-0.11□□□□□ -2.43
ITGB5-213ENST00000608945 ATRQ13535 2644 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 ZNF292O60281 2723 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 ABCA4P78363 2273 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 PKD1L2Q7Z442 2459 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 MYO18BQ8IUG5 2567 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 K7ERJ3 54 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 C1QBP02746 253 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 MT-ND6P03923 174 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 GYPBP06028 91 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 EVI2AP22794 236 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 PHBP35232 272 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 PPP1R2P41236 205 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 RPL35P42766 123 aaKnown RBP-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 INSL3P51460 131 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 HBBP68871 147 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 MRPS36P82909 103 aaKnown RBP-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 LRP2P98164 4655 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 REEP5Q00765 189 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 TMED2Q15363 201 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 GLYATL3Q5SZD4 288 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 HACD4Q5VWC8 232 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 MALSU1Q96EH3 234 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 MCEEQ96PE7 176 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 OR4C12Q96R67 309 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 PBDC1Q9BVG4 233 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 ARMC1Q9NVT9 282 aa-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 SETXQ7Z333 2677 aaKnown RBP-0.12□□□□□ -2.43
ITGB5-213ENST00000608945 UHRF1BP1Q6BDS2 1440 aa-0.13□□□□□ -2.43
ITGB5-213ENST00000608945 MIA2Q96PC5 1412 aa-0.13□□□□□ -2.43
ITGB5-213ENST00000608945 IGSF10Q6WRI0 2623 aa-0.13□□□□□ -2.43
ITGB5-213ENST00000608945 LAMA2P24043 3122 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms