RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
LINC01109-201ENST00000603837 ZNF747Q9BV97 191 aa3.74□□□□□ -1.81
LINC01109-201ENST00000603837 NPCDR1Q9BY65 106 aa3.74□□□□□ -1.81
LINC01109-201ENST00000603837 PBOV1Q9GZY1 135 aa3.74□□□□□ -1.81
LINC01109-201ENST00000603837 UNC13CQ8NB66 2214 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 TMSB15BA0A087X1C1 80 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 A8MWV9 139 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CECR9P0C854 216 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 PFN2P35080 140 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 PI4KAP42356 2102 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 SPINT3P49223 89 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 PSMB2P49721 201 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 FBXW4P57775 412 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CACNG7P62955 275 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CST6Q15828 149 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 ZNF718Q3SXZ3 478 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CIARTQ8N365 385 aaPredicted RBP3.73□□□□□ -1.81
LINC01109-201ENST00000603837 C15orf53Q8NAA6 179 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 SMRP1Q8NCR6 262 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 OR9G1Q8NH87 305 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 SPATA3Q8NHX4 192 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CACNG5Q9UF02 275 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CACNA1GO43497 2377 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 IGKV1D-42A0A075B6H8 117 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 TRAV8-1A0A0A6YYK1 113 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 IGLV1-36A0A0B4J1U3 117 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 M0R1B8 84 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 RPL30P62888 115 aaKnown RBP3.73□□□□□ -1.81
LINC01109-201ENST00000603837 LGALS9BQ3B8N2 356 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 LGALS9CQ6DKI2 356 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 SFTPA2Q8IWL1 248 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 C3orf22Q8N5N4 141 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 ANKRD29Q8N6D5 301 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 OR8A1Q8NGG7 326 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 CPAMD8Q8IZJ3 1885 aa3.73□□□□□ -1.81
LINC01109-201ENST00000603837 TMED7-TICAM2A0A0A6YYA0 188 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 PIGBOS1A0A0B4J2F0 54 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 CTLA4P16410 223 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 C19orf54Q5BKX5 351 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ZC2HC1BQ5TFG8 222 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 Q6ZR03 302 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ZNF818PQ6ZRF7 136 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 FMC1Q96HJ9 113 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 AICDAQ9GZX7 198 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ASCC3Q8N3C0 2202 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ALPK2Q86TB3 2170 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 LINC01548A6NM66 108 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 C17orf51A8MQB3 221 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 H3BVH4 76 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 K7ESM1 405 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 IL4P05112 153 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 LGALS1P09382 135 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 EGR2P11161 476 aaPredicted RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ZNF138P52744 262 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 ZNF816Q0VGE8 651 aaPredicted RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 TCF15Q12870 199 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 DAZ2Q13117 558 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 KISS1Q15726 138 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 FAM201AQ5SY85 155 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 TMEM14EPQ6UXP3 125 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 DAZ4Q86SG3 579 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 BORCS8Q96FH0 119 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 DAZ1Q9NQZ3 744 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 DAZ3Q9NR90 486 aaKnown RBP3.72□□□□□ -1.81
LINC01109-201ENST00000603837 IL36RNQ9UBH0 155 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 SHANK1Q9Y566 2161 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 MUC6Q6W4X9 2439 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 DMXL1Q9Y485 3027 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 KRTAP9-6A0A140TA67 174 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 C4orf51C9J302 202 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 SMKR1H3BMG3 65 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 RRHO14718 337 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 UQCRQO14949 82 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 LTAP01374 205 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 GCHFRP30047 84 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 EDDM3BP56851 147 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 GAGE2AQ6NT46 116 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 Q6ZRM9 215 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 LY6G5BQ8NDX9 201 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 BMFQ96LC9 184 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 PYGO1Q9Y3Y4 419 aa3.72□□□□□ -1.81
LINC01109-201ENST00000603837 CEP250Q9BV73 2442 aa3.71□□□□□ -1.81
LINC01109-201ENST00000603837 RBAKDNA6NC62 111 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 C15orf62A8K5M9 175 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 MGST3O14880 152 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 HOXA3O43365 443 aaPredicted RBP3.71□□□□□ -1.82
LINC01109-201ENST00000603837 NDUFS7O75251 213 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 GYPEP15421 78 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 PCSK4Q6UW60 755 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 DGAT2L6Q6ZPD8 337 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 DEFB123Q8N688 67 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 OTORQ9NRC9 128 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 EPDR1Q9UM22 224 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 TRBV25-1A0A075B6N4 114 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 TRAV2A0A0B4J234 112 aa3.71□□□□□ -1.82
LINC01109-201ENST00000603837 IGKV1-9A0A0C4DH69 117 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms