RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	MCUB	Q9NWR8	336 aa		12.37	□□□□□ -0.43
IRF3-231	ENST00000602190	KLLN	B2CW77	178 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	FAM229A	H3BQW9	127 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	SFT2D2	O95562	160 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	SPCS2	Q15005	226 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	LYPD5	Q6UWN5	251 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	TMEM14EP	Q6UXP3	125 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	ZNF680	Q8NEM1	530 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	TRIM63	Q969Q1	353 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	FAM19A4	Q96LR4	140 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	NPVF	Q9HCQ7	196 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	RSL24D1	Q9UHA3	163 aa	Known RBP	12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	ICOS	Q9Y6W8	199 aa		12.36	□□□□□ -0.43
IRF3-231	ENST00000602190	TRAV12-3	A0A0B4J271	114 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	CCNK	O75909	580 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	LEP	P41159	167 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	TCL1A	P56279	114 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	MORN5	Q5VZ52	161 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	ST6GAL2	Q96JF0	529 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	GSN-AS1	Q9NRJ2	163 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	FUT9	Q9Y231	359 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	PXMP4	Q9Y6I8	212 aa		12.35	□□□□□ -0.43
IRF3-231	ENST00000602190	TRGV2	A0A075B6R0	118 aa		12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	PPP1R1A	Q13522	171 aa		12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	LINC00305	Q7Z4B0	112 aa		12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	BPIFA4P	Q86YQ2	179 aa		12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	TMEM37	Q8WXS4	190 aa		12.34	□□□□□ -0.43
IRF3-231	ENST00000602190	SMCO3	A2RU48	225 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190		H3BQ15	152 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	SLC25A5	P05141	298 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	ANXA7	P20073	488 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	VAMP1	P23763	118 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	CRYBA4	P53673	196 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	POLR2G	P62487	172 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	IBA57	Q5T440	356 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	DYNC2LI1	Q8TCX1	351 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	SMIM8	Q96KF7	97 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	VGLL1	Q99990	258 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	MSRB1	Q9NZV6	116 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	CCDC59	Q9P031	241 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	PRO0255	Q9UI72	69 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	DNAH8	Q96JB1	4490 aa		12.33	□□□□□ -0.44
IRF3-231	ENST00000602190	LRCOL1	A6NCL2	159 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	PAX4	O43316	350 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	ZNF253	O75346	499 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	HOXB5	P09067	269 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	SLC38A11	Q08AI6	406 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	OPCML	Q14982	345 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	PSENEN	Q9NZ42	101 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	LY96	Q9Y6Y9	160 aa		12.32	□□□□□ -0.44
IRF3-231	ENST00000602190	HMCN2	Q8NDA2	5059 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	TRGV1	A0A0A0MS02	117 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	C7orf71	A4D174	169 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	SNRPC	P09234	159 aa	Known RBP	12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	SLA	Q13239	276 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	FHL2	Q14192	279 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	ZNF546	Q86UE3	836 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	EIF4E3	Q8N5X7	224 aa	Known RBP	12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	DEDD2	Q8WXF8	326 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	MRPL53	Q96EL3	112 aa	Known RBP	12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	KLF12	Q9Y4X4	402 aa		12.31	□□□□□ -0.44
IRF3-231	ENST00000602190	TRAV9-2	A0A087WT02	112 aa		12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	AGPAT2	O15120	278 aa		12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	CRISP2	P16562	243 aa		12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	FAU	P35544	74 aa	Known RBP	12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	HAMP	P81172	84 aa		12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	MRPL23	Q16540	153 aa	Known RBP	12.3	□□□□□ -0.44
IRF3-231	ENST00000602190	NTN5	Q8WTR8	489 aa	Predicted RBP	12.3	□□□□□ -0.44
IRF3-231	ENST00000602190		H3BTX0	84 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190		J3KRW8	73 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190		J3QL48	77 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	C1QB	P02746	253 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	UBE2M	P61081	183 aa	Known RBP	12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	RRAS2	P62070	204 aa	Predicted RBP	12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	ARL16	Q0P5N6	197 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	GUK1	Q16774	197 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	NEGR1	Q7Z3B1	354 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	WFDC10B	Q8IUB3	73 aa		12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	SLIRP	Q9GZT3	109 aa	Known RBP	12.29	□□□□□ -0.44
IRF3-231	ENST00000602190	TSC22D2	O75157	780 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	METTL15P1	P0C7V9	234 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	TNFSF8	P32971	234 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	TAS2R30	P59541	319 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	CD300C	Q08708	224 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	IQCF2	Q8IXL9	164 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	OR10P1	Q8NGE3	313 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	MGST2	Q99735	147 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	GGACT	Q9BVM4	153 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	HHLA3	Q9XRX5	114 aa		12.28	□□□□□ -0.44
IRF3-231	ENST00000602190	NMB	P08949	121 aa		12.27	□□□□□ -0.45
IRF3-231	ENST00000602190	OR4E1	P0C645	316 aa		12.27	□□□□□ -0.45
IRF3-231	ENST00000602190	BTN1A1	Q13410	526 aa		12.27	□□□□□ -0.45
IRF3-231	ENST00000602190		Q6ZSA8	131 aa		12.27	□□□□□ -0.45
IRF3-231	ENST00000602190	MRPL32	Q9BYC8	188 aa	Known RBP	12.27	□□□□□ -0.45
IRF3-231	ENST00000602190	FAM30A	Q9NZY2	134 aa		12.27	□□□□□ -0.45
IRF3-231	ENST00000602190	GOSR2	O14653	212 aa		12.26	□□□□□ -0.45
IRF3-231	ENST00000602190	SSSCA1	O60232	199 aa		12.26	□□□□□ -0.45
IRF3-231	ENST00000602190	ZFAND2A	Q8N6M9	145 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms